Gene : orange1.1g043997m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  2
Name:  ? orange1.1g043997m.g Secondary Identifier:  ? PAC:18117683
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g043997m.g 0.5kb upstream 0.5kb upstream 1332 true scaffold03639: 5770-7101 Citrus sinensis
orange1.1g043997m.g 0.5kb upstream 0.5kb upstream 500 false scaffold03639: 5770-6269 Citrus sinensis
orange1.1g043997m.g 0.5kb downstream 0.5kb downstream 1332 true scaffold03639: 6270-7601 Citrus sinensis
orange1.1g043997m.g 0.5kb downstream 0.5kb downstream 500 false scaffold03639: 7102-7601 Citrus sinensis
orange1.1g043997m.g 1.0kb upstream 1.0kb upstream 1832 true scaffold03639: 5270-7101 Citrus sinensis
orange1.1g043997m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold03639: 5270-6269 Citrus sinensis
orange1.1g043997m.g 1.0kb downstream 1.0kb downstream 1832 true scaffold03639: 6270-8101 Citrus sinensis
orange1.1g043997m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold03639: 7102-8101 Citrus sinensis
orange1.1g043997m.g 2.0kb upstream 2.0kb upstream 2832 true scaffold03639: 4270-7101 Citrus sinensis
orange1.1g043997m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold03639: 4270-6269 Citrus sinensis
orange1.1g043997m.g 2.0kb downstream 2.0kb downstream 2074 true scaffold03639: 6270-8343 Citrus sinensis
orange1.1g043997m.g 2.0kb downstream 2.0kb downstream 1242 false scaffold03639: 7102-8343 Citrus sinensis
orange1.1g043997m.g 5.0kb upstream 5.0kb upstream 5832 true scaffold03639: 1270-7101 Citrus sinensis
orange1.1g043997m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold03639: 1270-6269 Citrus sinensis
orange1.1g043997m.g 5.0kb downstream 5.0kb downstream 2074 true scaffold03639: 6270-8343 Citrus sinensis
orange1.1g043997m.g 5.0kb downstream 5.0kb downstream 1242 false scaffold03639: 7102-8343 Citrus sinensis
orange1.1g043997m.g 10.0kb upstream 10.0kb upstream 7101 true scaffold03639: 1-7101 Citrus sinensis
orange1.1g043997m.g 10.0kb upstream 10.0kb upstream 6269 false scaffold03639: 1-6269 Citrus sinensis
orange1.1g043997m.g 10.0kb downstream 10.0kb downstream 2074 true scaffold03639: 6270-8343 Citrus sinensis
orange1.1g043997m.g 10.0kb downstream 10.0kb downstream 1242 false scaffold03639: 7102-8343 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121532170 5273 Angiosperm Singleton cluster - no MSA
124331790 5266 SBM Singleton cluster - no MSA
124177035 5268 Malvidae Singleton cluster - no MSA
123899566 5270 Rosid Singleton cluster - no MSA
123481422 5271 Pentapetalae Singleton cluster - no MSA
122516674 5272 Eudicot Singleton cluster - no MSA
120804932 5274 Embryophyte Singleton cluster - no MSA
122846486 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain