Gene : Traes_6AS_B5ED3BA5B T. aestivum v2.2
Defline:  (1 of 3) PF00623//PF04983//PF04997//PF04998 - RNA polymerase Rpb1, domain 2 (RNA_pol_Rpb1_2) // RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 1 (RNA_pol_Rpb1_1) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) Genomic Order:  2
Name:  ? Traes_6AS_B5ED3BA5B Secondary Identifier:  ? PAC:31796252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_6AS_B5ED3BA5B 0.5kb upstream 0.5kb upstream 12074 true ta_iwgsc_6as_v1_4362789: 13845-25918 Triticum aestivum
Traes_6AS_B5ED3BA5B 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_6as_v1_4362789: 25419-25918 Triticum aestivum
Traes_6AS_B5ED3BA5B 0.5kb downstream 0.5kb downstream 12074 true ta_iwgsc_6as_v1_4362789: 13345-25418 Triticum aestivum
Traes_6AS_B5ED3BA5B 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_6as_v1_4362789: 13345-13844 Triticum aestivum
Traes_6AS_B5ED3BA5B 1.0kb upstream 1.0kb upstream 12574 true ta_iwgsc_6as_v1_4362789: 13845-26418 Triticum aestivum
Traes_6AS_B5ED3BA5B 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_6as_v1_4362789: 25419-26418 Triticum aestivum
Traes_6AS_B5ED3BA5B 1.0kb downstream 1.0kb downstream 12574 true ta_iwgsc_6as_v1_4362789: 12845-25418 Triticum aestivum
Traes_6AS_B5ED3BA5B 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_6as_v1_4362789: 12845-13844 Triticum aestivum
Traes_6AS_B5ED3BA5B 2.0kb upstream 2.0kb upstream 13574 true ta_iwgsc_6as_v1_4362789: 13845-27418 Triticum aestivum
Traes_6AS_B5ED3BA5B 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_6as_v1_4362789: 25419-27418 Triticum aestivum
Traes_6AS_B5ED3BA5B 2.0kb downstream 2.0kb downstream 13574 true ta_iwgsc_6as_v1_4362789: 11845-25418 Triticum aestivum
Traes_6AS_B5ED3BA5B 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_6as_v1_4362789: 11845-13844 Triticum aestivum
Traes_6AS_B5ED3BA5B 5.0kb upstream 5.0kb upstream 16574 true ta_iwgsc_6as_v1_4362789: 13845-30418 Triticum aestivum
Traes_6AS_B5ED3BA5B 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_6as_v1_4362789: 25419-30418 Triticum aestivum
Traes_6AS_B5ED3BA5B 5.0kb downstream 5.0kb downstream 16574 true ta_iwgsc_6as_v1_4362789: 8845-25418 Triticum aestivum
Traes_6AS_B5ED3BA5B 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_6as_v1_4362789: 8845-13844 Triticum aestivum
Traes_6AS_B5ED3BA5B 10.0kb upstream 10.0kb upstream 20814 true ta_iwgsc_6as_v1_4362789: 13845-34658 Triticum aestivum
Traes_6AS_B5ED3BA5B 10.0kb upstream 10.0kb upstream 9240 false ta_iwgsc_6as_v1_4362789: 25419-34658 Triticum aestivum
Traes_6AS_B5ED3BA5B 10.0kb downstream 10.0kb downstream 21574 true ta_iwgsc_6as_v1_4362789: 3845-25418 Triticum aestivum
Traes_6AS_B5ED3BA5B 10.0kb downstream 10.0kb downstream 10000 false ta_iwgsc_6as_v1_4362789: 3845-13844 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121970650 5273 Angiosperm View MSA
124544094 5269 Grass View MSA
121241143 5274 Embryophyte View MSA
123279956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain