Gene : 438530 S. moellendorffii v1.0
Defline:  (1 of 3) PTHR10357//PTHR10357:SF149 - ALPHA-AMYLASE Genomic Order:  497
Name:  ? 438530 Secondary Identifier:  ? PAC:15421792
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii PWY-6724 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
438530 0.5kb upstream 0.5kb upstream 3159 true scaffold_3: 3095887-3099045 Selaginella moellendorffii
438530 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3095887-3096386 Selaginella moellendorffii
438530 0.5kb downstream 0.5kb downstream 3159 true scaffold_3: 3096387-3099545 Selaginella moellendorffii
438530 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3099046-3099545 Selaginella moellendorffii
438530 1.0kb upstream 1.0kb upstream 3659 true scaffold_3: 3095387-3099045 Selaginella moellendorffii
438530 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3095387-3096386 Selaginella moellendorffii
438530 1.0kb downstream 1.0kb downstream 3659 true scaffold_3: 3096387-3100045 Selaginella moellendorffii
438530 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3099046-3100045 Selaginella moellendorffii
438530 2.0kb upstream 2.0kb upstream 4659 true scaffold_3: 3094387-3099045 Selaginella moellendorffii
438530 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3094387-3096386 Selaginella moellendorffii
438530 2.0kb downstream 2.0kb downstream 4659 true scaffold_3: 3096387-3101045 Selaginella moellendorffii
438530 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3099046-3101045 Selaginella moellendorffii
438530 5.0kb upstream 5.0kb upstream 7659 true scaffold_3: 3091387-3099045 Selaginella moellendorffii
438530 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3091387-3096386 Selaginella moellendorffii
438530 5.0kb downstream 5.0kb downstream 7659 true scaffold_3: 3096387-3104045 Selaginella moellendorffii
438530 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3099046-3104045 Selaginella moellendorffii
438530 10.0kb upstream 10.0kb upstream 12659 true scaffold_3: 3086387-3099045 Selaginella moellendorffii
438530 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3086387-3096386 Selaginella moellendorffii
438530 10.0kb downstream 10.0kb downstream 12659 true scaffold_3: 3096387-3109045 Selaginella moellendorffii
438530 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3099046-3109045 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121318164 5274 Embryophyte Singleton cluster - no MSA
123355268 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain