Gene : Vocar.0014s0250 V. carteri v2.1

Defline:  (1 of 2) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  250
Name:  ? Vocar.0014s0250 Secondary Identifier:  ? PAC:32888569

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PWY-5188 Volvox carteri pathologic  
Vcarteri TRNA-CHARGING-PWY Volvox carteri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0014s0250 0.5kb upstream 0.5kb upstream 6233 true scaffold_14: 1962718-1968950 Volvox carteri
Vocar.0014s0250 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 1968451-1968950 Volvox carteri
Vocar.0014s0250 0.5kb downstream 0.5kb downstream 6233 true scaffold_14: 1962218-1968450 Volvox carteri
Vocar.0014s0250 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 1962218-1962717 Volvox carteri
Vocar.0014s0250 1.0kb upstream 1.0kb upstream 6733 true scaffold_14: 1962718-1969450 Volvox carteri
Vocar.0014s0250 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 1968451-1969450 Volvox carteri
Vocar.0014s0250 1.0kb downstream 1.0kb downstream 6733 true scaffold_14: 1961718-1968450 Volvox carteri
Vocar.0014s0250 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 1961718-1962717 Volvox carteri
Vocar.0014s0250 2.0kb upstream 2.0kb upstream 7733 true scaffold_14: 1962718-1970450 Volvox carteri
Vocar.0014s0250 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 1968451-1970450 Volvox carteri
Vocar.0014s0250 2.0kb downstream 2.0kb downstream 7733 true scaffold_14: 1960718-1968450 Volvox carteri
Vocar.0014s0250 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 1960718-1962717 Volvox carteri
Vocar.0014s0250 5.0kb upstream 5.0kb upstream 10733 true scaffold_14: 1962718-1973450 Volvox carteri
Vocar.0014s0250 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 1968451-1973450 Volvox carteri
Vocar.0014s0250 5.0kb downstream 5.0kb downstream 10733 true scaffold_14: 1957718-1968450 Volvox carteri
Vocar.0014s0250 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 1957718-1962717 Volvox carteri
Vocar.0014s0250 10.0kb upstream 10.0kb upstream 15733 true scaffold_14: 1962718-1978450 Volvox carteri
Vocar.0014s0250 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 1968451-1978450 Volvox carteri
Vocar.0014s0250 10.0kb downstream 10.0kb downstream 15733 true scaffold_14: 1952718-1968450 Volvox carteri
Vocar.0014s0250 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 1952718-1962717 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109823 5260 Chlorophyte View MSA
123426828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain