Gene : 413264 S. moellendorffii v1.0
Defline:  (1 of 3) 2.3.3.13 - 2-isopropylmalate synthase / Isopropylmalate synthetase Genomic Order:  142
Name:  ? 413264 Secondary Identifier:  ? PAC:15413014
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii BRANCHED-CHAIN-AA-SYN-PWY Selaginella moellendorffii pathologic  
Smoellendorffii LEUSYN-PWY Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
413264 0.5kb upstream 0.5kb upstream 3223 true scaffold_20: 734235-737457 Selaginella moellendorffii
413264 0.5kb upstream 0.5kb upstream 500 false scaffold_20: 736958-737457 Selaginella moellendorffii
413264 0.5kb downstream 0.5kb downstream 3223 true scaffold_20: 733735-736957 Selaginella moellendorffii
413264 0.5kb downstream 0.5kb downstream 500 false scaffold_20: 733735-734234 Selaginella moellendorffii
413264 1.0kb upstream 1.0kb upstream 3723 true scaffold_20: 734235-737957 Selaginella moellendorffii
413264 1.0kb upstream 1.0kb upstream 1000 false scaffold_20: 736958-737957 Selaginella moellendorffii
413264 1.0kb downstream 1.0kb downstream 3723 true scaffold_20: 733235-736957 Selaginella moellendorffii
413264 1.0kb downstream 1.0kb downstream 1000 false scaffold_20: 733235-734234 Selaginella moellendorffii
413264 2.0kb upstream 2.0kb upstream 4723 true scaffold_20: 734235-738957 Selaginella moellendorffii
413264 2.0kb upstream 2.0kb upstream 2000 false scaffold_20: 736958-738957 Selaginella moellendorffii
413264 2.0kb downstream 2.0kb downstream 4723 true scaffold_20: 732235-736957 Selaginella moellendorffii
413264 2.0kb downstream 2.0kb downstream 2000 false scaffold_20: 732235-734234 Selaginella moellendorffii
413264 5.0kb upstream 5.0kb upstream 7723 true scaffold_20: 734235-741957 Selaginella moellendorffii
413264 5.0kb upstream 5.0kb upstream 5000 false scaffold_20: 736958-741957 Selaginella moellendorffii
413264 5.0kb downstream 5.0kb downstream 7723 true scaffold_20: 729235-736957 Selaginella moellendorffii
413264 5.0kb downstream 5.0kb downstream 5000 false scaffold_20: 729235-734234 Selaginella moellendorffii
413264 10.0kb upstream 10.0kb upstream 12723 true scaffold_20: 734235-746957 Selaginella moellendorffii
413264 10.0kb upstream 10.0kb upstream 10000 false scaffold_20: 736958-746957 Selaginella moellendorffii
413264 10.0kb downstream 10.0kb downstream 12723 true scaffold_20: 724235-736957 Selaginella moellendorffii
413264 10.0kb downstream 10.0kb downstream 10000 false scaffold_20: 724235-734234 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121316828 5274 Embryophyte Singleton cluster - no MSA
123353934 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain