Gene : evm_27.TU.AmTr_v1.0_scaffold00107.3 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22912:SF48 - NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3 Genomic Order:  3
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00107.3 Secondary Identifier:  ? PAC:31572446
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda THIOREDOX-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00107.3 0.5kb upstream 0.5kb upstream 24607 true AmTr_v1.0_scaffold00107: 82558-107164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00107: 82558-83057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 0.5kb downstream 0.5kb downstream 24607 true AmTr_v1.0_scaffold00107: 83058-107664 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00107: 107165-107664 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 1.0kb upstream 1.0kb upstream 25107 true AmTr_v1.0_scaffold00107: 82058-107164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00107: 82058-83057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 1.0kb downstream 1.0kb downstream 25107 true AmTr_v1.0_scaffold00107: 83058-108164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00107: 107165-108164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 2.0kb upstream 2.0kb upstream 26107 true AmTr_v1.0_scaffold00107: 81058-107164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00107: 81058-83057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 2.0kb downstream 2.0kb downstream 26107 true AmTr_v1.0_scaffold00107: 83058-109164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00107: 107165-109164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 5.0kb upstream 5.0kb upstream 29107 true AmTr_v1.0_scaffold00107: 78058-107164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00107: 78058-83057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 5.0kb downstream 5.0kb downstream 29107 true AmTr_v1.0_scaffold00107: 83058-112164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00107: 107165-112164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 10.0kb upstream 10.0kb upstream 34107 true AmTr_v1.0_scaffold00107: 73058-107164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00107: 73058-83057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 10.0kb downstream 10.0kb downstream 34107 true AmTr_v1.0_scaffold00107: 83058-117164 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.3 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00107: 107165-117164 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046832 5273 Angiosperm View MSA
121345870 5274 Embryophyte View MSA
123426423 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain