Gene : evm_27.TU.AmTr_v1.0_scaffold00069.34 A. trichopoda v1.0
Defline:  (1 of 1) PTHR24128:SF13 - E3 UBIQUITIN-PROTEIN LIGASE XBAT33 Genomic Order:  34
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00069.34 Secondary Identifier:  ? PAC:31558102
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00069.34 0.5kb upstream 0.5kb upstream 9853 true AmTr_v1.0_scaffold00069: 551629-561481 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00069: 560982-561481 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 0.5kb downstream 0.5kb downstream 9853 true AmTr_v1.0_scaffold00069: 551129-560981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00069: 551129-551628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 1.0kb upstream 1.0kb upstream 10353 true AmTr_v1.0_scaffold00069: 551629-561981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00069: 560982-561981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 1.0kb downstream 1.0kb downstream 10353 true AmTr_v1.0_scaffold00069: 550629-560981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00069: 550629-551628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 2.0kb upstream 2.0kb upstream 11353 true AmTr_v1.0_scaffold00069: 551629-562981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00069: 560982-562981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 2.0kb downstream 2.0kb downstream 11353 true AmTr_v1.0_scaffold00069: 549629-560981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00069: 549629-551628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 5.0kb upstream 5.0kb upstream 14353 true AmTr_v1.0_scaffold00069: 551629-565981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00069: 560982-565981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 5.0kb downstream 5.0kb downstream 14353 true AmTr_v1.0_scaffold00069: 546629-560981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00069: 546629-551628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 10.0kb upstream 10.0kb upstream 19353 true AmTr_v1.0_scaffold00069: 551629-570981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00069: 560982-570981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 10.0kb downstream 10.0kb downstream 19353 true AmTr_v1.0_scaffold00069: 541629-560981 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.34 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00069: 541629-551628 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042206 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348775 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain