Gene : evm_27.TU.AmTr_v1.0_scaffold00061.236 A. trichopoda v1.0
Defline:  (1 of 3) 2.1.2.11 - 3-methyl-2-oxobutanoate hydroxymethyltransferase / Ketopantoate hydroxymethyltransferase Genomic Order:  229
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00061.236 Secondary Identifier:  ? PAC:31564892
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PANTO-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00061.236 0.5kb upstream 0.5kb upstream 5103 true AmTr_v1.0_scaffold00061: 3625791-3630893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00061: 3625791-3626290 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 0.5kb downstream 0.5kb downstream 5103 true AmTr_v1.0_scaffold00061: 3626291-3631393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00061: 3630894-3631393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 1.0kb upstream 1.0kb upstream 5603 true AmTr_v1.0_scaffold00061: 3625291-3630893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00061: 3625291-3626290 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 1.0kb downstream 1.0kb downstream 5603 true AmTr_v1.0_scaffold00061: 3626291-3631893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00061: 3630894-3631893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 2.0kb upstream 2.0kb upstream 6603 true AmTr_v1.0_scaffold00061: 3624291-3630893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00061: 3624291-3626290 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 2.0kb downstream 2.0kb downstream 6603 true AmTr_v1.0_scaffold00061: 3626291-3632893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00061: 3630894-3632893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 5.0kb upstream 5.0kb upstream 9603 true AmTr_v1.0_scaffold00061: 3621291-3630893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00061: 3621291-3626290 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 5.0kb downstream 5.0kb downstream 9603 true AmTr_v1.0_scaffold00061: 3626291-3635893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00061: 3630894-3635893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 10.0kb upstream 10.0kb upstream 14603 true AmTr_v1.0_scaffold00061: 3616291-3630893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00061: 3616291-3626290 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 10.0kb downstream 10.0kb downstream 14603 true AmTr_v1.0_scaffold00061: 3626291-3640893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.236 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00061: 3630894-3640893 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047605 5273 Angiosperm View MSA
121346037 5274 Embryophyte View MSA
123424122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain