Gene : evm_27.TU.AmTr_v1.0_scaffold00059.62 A. trichopoda v1.0
Defline:  (1 of 2) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) / Rer2p Z-prenyltransferase Genomic Order:  61
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.62 Secondary Identifier:  ? PAC:31566068
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6129 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.62 0.5kb upstream 0.5kb upstream 15088 true AmTr_v1.0_scaffold00059: 997473-1012560 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 1012061-1012560 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 0.5kb downstream 0.5kb downstream 15088 true AmTr_v1.0_scaffold00059: 996973-1012060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 996973-997472 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 1.0kb upstream 1.0kb upstream 15588 true AmTr_v1.0_scaffold00059: 997473-1013060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 1012061-1013060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 1.0kb downstream 1.0kb downstream 15588 true AmTr_v1.0_scaffold00059: 996473-1012060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 996473-997472 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 2.0kb upstream 2.0kb upstream 16588 true AmTr_v1.0_scaffold00059: 997473-1014060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 1012061-1014060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 2.0kb downstream 2.0kb downstream 16588 true AmTr_v1.0_scaffold00059: 995473-1012060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 995473-997472 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 5.0kb upstream 5.0kb upstream 19588 true AmTr_v1.0_scaffold00059: 997473-1017060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 1012061-1017060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 5.0kb downstream 5.0kb downstream 19588 true AmTr_v1.0_scaffold00059: 992473-1012060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 992473-997472 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 10.0kb upstream 10.0kb upstream 24588 true AmTr_v1.0_scaffold00059: 997473-1022060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 1012061-1022060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 10.0kb downstream 10.0kb downstream 24588 true AmTr_v1.0_scaffold00059: 987473-1012060 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.62 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 987473-997472 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain