Gene : evm_27.TU.AmTr_v1.0_scaffold00057.25 A. trichopoda v1.0
Defline:  (1 of 1) 6.2.1.2 - Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  25
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.25 Secondary Identifier:  ? PAC:31574323
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-1121 Amborella trichopoda pathologic  
Atrichopoda PWY-321 Amborella trichopoda pathologic  
Atrichopoda PWY-5136 Amborella trichopoda pathologic  
Atrichopoda PWY-5143 Amborella trichopoda pathologic  
Atrichopoda PWY-5147 Amborella trichopoda pathologic  
Atrichopoda PWY-5156 Amborella trichopoda pathologic  
Atrichopoda PWY-561 Amborella trichopoda pathologic  
Atrichopoda PWY-5885 Amborella trichopoda pathologic  
Atrichopoda PWY-5971 Amborella trichopoda pathologic  
Atrichopoda PWY-5989 Amborella trichopoda pathologic  
Atrichopoda PWY66-21 Amborella trichopoda pathologic  
Atrichopoda PWY-6733 Amborella trichopoda pathologic  
Atrichopoda PWY-6803 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.25 0.5kb upstream 0.5kb upstream 17667 true AmTr_v1.0_scaffold00057: 418564-436230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 418564-419063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 0.5kb downstream 0.5kb downstream 17667 true AmTr_v1.0_scaffold00057: 419064-436730 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 436231-436730 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 1.0kb upstream 1.0kb upstream 18167 true AmTr_v1.0_scaffold00057: 418064-436230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 418064-419063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 1.0kb downstream 1.0kb downstream 18167 true AmTr_v1.0_scaffold00057: 419064-437230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 436231-437230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 2.0kb upstream 2.0kb upstream 19167 true AmTr_v1.0_scaffold00057: 417064-436230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 417064-419063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 2.0kb downstream 2.0kb downstream 19167 true AmTr_v1.0_scaffold00057: 419064-438230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 436231-438230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 5.0kb upstream 5.0kb upstream 22167 true AmTr_v1.0_scaffold00057: 414064-436230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 414064-419063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 5.0kb downstream 5.0kb downstream 22167 true AmTr_v1.0_scaffold00057: 419064-441230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 436231-441230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 10.0kb upstream 10.0kb upstream 27167 true AmTr_v1.0_scaffold00057: 409064-436230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 409064-419063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 10.0kb downstream 10.0kb downstream 27167 true AmTr_v1.0_scaffold00057: 419064-446230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.25 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 436231-446230 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045241 5273 Angiosperm View MSA
121345073 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain