Gene : evm_27.TU.AmTr_v1.0_scaffold00045.85 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  84
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.85 Secondary Identifier:  ? PAC:31567538
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.85 0.5kb upstream 0.5kb upstream 2546 true AmTr_v1.0_scaffold00045: 1076746-1079291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 1076746-1077245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 0.5kb downstream 0.5kb downstream 2546 true AmTr_v1.0_scaffold00045: 1077246-1079791 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 1079292-1079791 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 1.0kb upstream 1.0kb upstream 3046 true AmTr_v1.0_scaffold00045: 1076246-1079291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 1076246-1077245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 1.0kb downstream 1.0kb downstream 3046 true AmTr_v1.0_scaffold00045: 1077246-1080291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 1079292-1080291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 2.0kb upstream 2.0kb upstream 4046 true AmTr_v1.0_scaffold00045: 1075246-1079291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 1075246-1077245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 2.0kb downstream 2.0kb downstream 4046 true AmTr_v1.0_scaffold00045: 1077246-1081291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 1079292-1081291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 5.0kb upstream 5.0kb upstream 7046 true AmTr_v1.0_scaffold00045: 1072246-1079291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 1072246-1077245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 5.0kb downstream 5.0kb downstream 7046 true AmTr_v1.0_scaffold00045: 1077246-1084291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 1079292-1084291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 10.0kb upstream 10.0kb upstream 12046 true AmTr_v1.0_scaffold00045: 1067246-1079291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 1067246-1077245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 10.0kb downstream 10.0kb downstream 12046 true AmTr_v1.0_scaffold00045: 1077246-1089291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.85 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 1079292-1089291 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048602 5273 Angiosperm View MSA
121311034 5274 Embryophyte View MSA
123348388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain