Gene : evm_27.TU.AmTr_v1.0_scaffold00029.191 A. trichopoda v1.0
Defline:  (1 of 4) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II Genomic Order:  191
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.191 Secondary Identifier:  ? PAC:31549959
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.191 0.5kb upstream 0.5kb upstream 4716 true AmTr_v1.0_scaffold00029: 2451143-2455858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 2451143-2451642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 0.5kb downstream 0.5kb downstream 4716 true AmTr_v1.0_scaffold00029: 2451643-2456358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 2455859-2456358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 1.0kb upstream 1.0kb upstream 5216 true AmTr_v1.0_scaffold00029: 2450643-2455858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 2450643-2451642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 1.0kb downstream 1.0kb downstream 5216 true AmTr_v1.0_scaffold00029: 2451643-2456858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 2455859-2456858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 2.0kb upstream 2.0kb upstream 6216 true AmTr_v1.0_scaffold00029: 2449643-2455858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 2449643-2451642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 2.0kb downstream 2.0kb downstream 6216 true AmTr_v1.0_scaffold00029: 2451643-2457858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 2455859-2457858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 5.0kb upstream 5.0kb upstream 9216 true AmTr_v1.0_scaffold00029: 2446643-2455858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 2446643-2451642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 5.0kb downstream 5.0kb downstream 9216 true AmTr_v1.0_scaffold00029: 2451643-2460858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 2455859-2460858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 10.0kb upstream 10.0kb upstream 14216 true AmTr_v1.0_scaffold00029: 2441643-2455858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 2441643-2451642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 10.0kb downstream 10.0kb downstream 14216 true AmTr_v1.0_scaffold00029: 2451643-2465858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.191 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 2455859-2465858 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain