Gene : Medtr0693s0030 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11615//PTHR11615:SF161 - NITRATE, FROMATE, IRON DEHYDROGENASE Description:  CASP POPTRDRAFT-like protein
Genomic Order:  1 Name:  ? Medtr0693s0030
Secondary Identifier:  ? PAC:31105868
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0693s0030 0.5kb upstream 0.5kb upstream 1812 true scaffold0693: 2278-4089 Medicago truncatula
Medtr0693s0030 0.5kb upstream 0.5kb upstream 500 false scaffold0693: 2278-2777 Medicago truncatula
Medtr0693s0030 0.5kb downstream 0.5kb downstream 1812 true scaffold0693: 2778-4589 Medicago truncatula
Medtr0693s0030 0.5kb downstream 0.5kb downstream 500 false scaffold0693: 4090-4589 Medicago truncatula
Medtr0693s0030 1.0kb upstream 1.0kb upstream 2312 true scaffold0693: 1778-4089 Medicago truncatula
Medtr0693s0030 1.0kb upstream 1.0kb upstream 1000 false scaffold0693: 1778-2777 Medicago truncatula
Medtr0693s0030 1.0kb downstream 1.0kb downstream 2312 true scaffold0693: 2778-5089 Medicago truncatula
Medtr0693s0030 1.0kb downstream 1.0kb downstream 1000 false scaffold0693: 4090-5089 Medicago truncatula
Medtr0693s0030 2.0kb upstream 2.0kb upstream 3312 true scaffold0693: 778-4089 Medicago truncatula
Medtr0693s0030 2.0kb upstream 2.0kb upstream 2000 false scaffold0693: 778-2777 Medicago truncatula
Medtr0693s0030 2.0kb downstream 2.0kb downstream 3312 true scaffold0693: 2778-6089 Medicago truncatula
Medtr0693s0030 2.0kb downstream 2.0kb downstream 2000 false scaffold0693: 4090-6089 Medicago truncatula
Medtr0693s0030 5.0kb upstream 5.0kb upstream 4089 true scaffold0693: 1-4089 Medicago truncatula
Medtr0693s0030 5.0kb upstream 5.0kb upstream 2777 false scaffold0693: 1-2777 Medicago truncatula
Medtr0693s0030 5.0kb downstream 5.0kb downstream 5131 true scaffold0693: 2778-7908 Medicago truncatula
Medtr0693s0030 5.0kb downstream 5.0kb downstream 3819 false scaffold0693: 4090-7908 Medicago truncatula
Medtr0693s0030 10.0kb upstream 10.0kb upstream 4089 true scaffold0693: 1-4089 Medicago truncatula
Medtr0693s0030 10.0kb upstream 10.0kb upstream 2777 false scaffold0693: 1-2777 Medicago truncatula
Medtr0693s0030 10.0kb downstream 10.0kb downstream 5131 true scaffold0693: 2778-7908 Medicago truncatula
Medtr0693s0030 10.0kb downstream 10.0kb downstream 3819 false scaffold0693: 4090-7908 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301373 5265 Fabidae View MSA
124074610 5270 Rosid View MSA
123751007 5271 Pentapetalae View MSA
122791219 5272 Eudicot View MSA
122049002 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.087        
cufflinks 12.301     High  
cufflinks 10.531     High  
cufflinks 0.054     Low Low
cufflinks 10.304        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.127        
cufflinks 10.755     High  
cufflinks 0.051     Low Low

0 Strain