Gene : Medtr8g494210 M. truncatula Mt4.0v1
Defline:  (1 of 9) PTHR23172 - AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED Description:  auxilin-like protein
Genomic Order:  4929 Name:  ? Medtr8g494210
Secondary Identifier:  ? PAC:31076400
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g494210 0.5kb upstream 0.5kb upstream 9704   true chr8: 39416195-39425898 Medicago truncatula
Medtr8g494210 0.5kb upstream 0.5kb upstream 500   false chr8: 39416195-39416694 Medicago truncatula
Medtr8g494210 0.5kb downstream 0.5kb downstream 9704   true chr8: 39416695-39426398 Medicago truncatula
Medtr8g494210 0.5kb downstream 0.5kb downstream 500   false chr8: 39425899-39426398 Medicago truncatula
Medtr8g494210 1.0kb upstream 1.0kb upstream 10204   true chr8: 39415695-39425898 Medicago truncatula
Medtr8g494210 1.0kb upstream 1.0kb upstream 1000   false chr8: 39415695-39416694 Medicago truncatula
Medtr8g494210 1.0kb downstream 1.0kb downstream 10204   true chr8: 39416695-39426898 Medicago truncatula
Medtr8g494210 1.0kb downstream 1.0kb downstream 1000   false chr8: 39425899-39426898 Medicago truncatula
Medtr8g494210 2.0kb upstream 2.0kb upstream 11204   true chr8: 39414695-39425898 Medicago truncatula
Medtr8g494210 2.0kb upstream 2.0kb upstream 2000   false chr8: 39414695-39416694 Medicago truncatula
Medtr8g494210 2.0kb downstream 2.0kb downstream 11204   true chr8: 39416695-39427898 Medicago truncatula
Medtr8g494210 2.0kb downstream 2.0kb downstream 2000   false chr8: 39425899-39427898 Medicago truncatula
Medtr8g494210 5.0kb upstream 5.0kb upstream 14204   true chr8: 39411695-39425898 Medicago truncatula
Medtr8g494210 5.0kb upstream 5.0kb upstream 5000   false chr8: 39411695-39416694 Medicago truncatula
Medtr8g494210 5.0kb downstream 5.0kb downstream 14204   true chr8: 39416695-39430898 Medicago truncatula
Medtr8g494210 5.0kb downstream 5.0kb downstream 5000   false chr8: 39425899-39430898 Medicago truncatula
Medtr8g494210 10.0kb upstream 10.0kb upstream 19204   true chr8: 39406695-39425898 Medicago truncatula
Medtr8g494210 10.0kb upstream 10.0kb upstream 10000   false chr8: 39406695-39416694 Medicago truncatula
Medtr8g494210 10.0kb downstream 10.0kb downstream 19204   true chr8: 39416695-39435898 Medicago truncatula
Medtr8g494210 10.0kb downstream 10.0kb downstream 10000   false chr8: 39425899-39435898 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304245 5265 Fabidae View MSA
124060536 5270 Rosid View MSA
123740796 5271 Pentapetalae View MSA
122795314 5272 Eudicot View MSA
122046480 5273 Angiosperm View MSA
121348738 5274 Embryophyte View MSA
123426248 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.231        
cufflinks 6.476        
cufflinks 6.827        
cufflinks 6.302        
cufflinks 5.71        
cufflinks 4.003       Low
cufflinks 6.393        
cufflinks 5.604        
cufflinks 7.225       High

0 Strain