Gene : Medtr6g091680 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10509//PTHR10509:SF29 - O-METHYLTRANSFERASE-RELATED Description:  caffeoyl-CoA 3-O-methyltransferase
Genomic Order:  3780 Name:  ? Medtr6g091680
Secondary Identifier:  ? PAC:31101641
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g091680 0.5kb upstream 0.5kb upstream 3194 true chr6: 34530206-34533399 Medicago truncatula
Medtr6g091680 0.5kb upstream 0.5kb upstream 500 false chr6: 34532900-34533399 Medicago truncatula
Medtr6g091680 0.5kb downstream 0.5kb downstream 3194 true chr6: 34529706-34532899 Medicago truncatula
Medtr6g091680 0.5kb downstream 0.5kb downstream 500 false chr6: 34529706-34530205 Medicago truncatula
Medtr6g091680 1.0kb upstream 1.0kb upstream 3694 true chr6: 34530206-34533899 Medicago truncatula
Medtr6g091680 1.0kb upstream 1.0kb upstream 1000 false chr6: 34532900-34533899 Medicago truncatula
Medtr6g091680 1.0kb downstream 1.0kb downstream 3694 true chr6: 34529206-34532899 Medicago truncatula
Medtr6g091680 1.0kb downstream 1.0kb downstream 1000 false chr6: 34529206-34530205 Medicago truncatula
Medtr6g091680 2.0kb upstream 2.0kb upstream 4694 true chr6: 34530206-34534899 Medicago truncatula
Medtr6g091680 2.0kb upstream 2.0kb upstream 2000 false chr6: 34532900-34534899 Medicago truncatula
Medtr6g091680 2.0kb downstream 2.0kb downstream 4694 true chr6: 34528206-34532899 Medicago truncatula
Medtr6g091680 2.0kb downstream 2.0kb downstream 2000 false chr6: 34528206-34530205 Medicago truncatula
Medtr6g091680 5.0kb upstream 5.0kb upstream 7694 true chr6: 34530206-34537899 Medicago truncatula
Medtr6g091680 5.0kb upstream 5.0kb upstream 5000 false chr6: 34532900-34537899 Medicago truncatula
Medtr6g091680 5.0kb downstream 5.0kb downstream 7694 true chr6: 34525206-34532899 Medicago truncatula
Medtr6g091680 5.0kb downstream 5.0kb downstream 5000 false chr6: 34525206-34530205 Medicago truncatula
Medtr6g091680 10.0kb upstream 10.0kb upstream 12694 true chr6: 34530206-34542899 Medicago truncatula
Medtr6g091680 10.0kb upstream 10.0kb upstream 10000 false chr6: 34532900-34542899 Medicago truncatula
Medtr6g091680 10.0kb downstream 10.0kb downstream 12694 true chr6: 34520206-34532899 Medicago truncatula
Medtr6g091680 10.0kb downstream 10.0kb downstream 10000 false chr6: 34520206-34530205 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314949 5265 Fabidae View MSA
124070229 5270 Rosid View MSA
123751667 5271 Pentapetalae View MSA
122774127 5272 Eudicot View MSA
122050348 5273 Angiosperm View MSA
121311864 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.091     High  
cufflinks 26.095     High  
cufflinks 20.402     High  
cufflinks 12.944     High  
cufflinks 16.119     High  
cufflinks 8.186        
cufflinks 32.219     High  
cufflinks 27.323     High  
cufflinks 1.875       Low

0 Strain