Gene : Medtr5g078200 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32227:SF52 - GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 Description:  glucan endo-1,3-beta-glucosidase-like protein
Genomic Order:  4307 Name:  ? Medtr5g078200
Secondary Identifier:  ? PAC:31091711
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g078200 0.5kb upstream 0.5kb upstream 4542 true chr5: 33412788-33417329 Medicago truncatula
Medtr5g078200 0.5kb upstream 0.5kb upstream 500 false chr5: 33412788-33413287 Medicago truncatula
Medtr5g078200 0.5kb downstream 0.5kb downstream 4542 true chr5: 33413288-33417829 Medicago truncatula
Medtr5g078200 0.5kb downstream 0.5kb downstream 500 false chr5: 33417330-33417829 Medicago truncatula
Medtr5g078200 1.0kb upstream 1.0kb upstream 5042 true chr5: 33412288-33417329 Medicago truncatula
Medtr5g078200 1.0kb upstream 1.0kb upstream 1000 false chr5: 33412288-33413287 Medicago truncatula
Medtr5g078200 1.0kb downstream 1.0kb downstream 5042 true chr5: 33413288-33418329 Medicago truncatula
Medtr5g078200 1.0kb downstream 1.0kb downstream 1000 false chr5: 33417330-33418329 Medicago truncatula
Medtr5g078200 2.0kb upstream 2.0kb upstream 6042 true chr5: 33411288-33417329 Medicago truncatula
Medtr5g078200 2.0kb upstream 2.0kb upstream 2000 false chr5: 33411288-33413287 Medicago truncatula
Medtr5g078200 2.0kb downstream 2.0kb downstream 6042 true chr5: 33413288-33419329 Medicago truncatula
Medtr5g078200 2.0kb downstream 2.0kb downstream 2000 false chr5: 33417330-33419329 Medicago truncatula
Medtr5g078200 5.0kb upstream 5.0kb upstream 9042 true chr5: 33408288-33417329 Medicago truncatula
Medtr5g078200 5.0kb upstream 5.0kb upstream 5000 false chr5: 33408288-33413287 Medicago truncatula
Medtr5g078200 5.0kb downstream 5.0kb downstream 9042 true chr5: 33413288-33422329 Medicago truncatula
Medtr5g078200 5.0kb downstream 5.0kb downstream 5000 false chr5: 33417330-33422329 Medicago truncatula
Medtr5g078200 10.0kb upstream 10.0kb upstream 14042 true chr5: 33403288-33417329 Medicago truncatula
Medtr5g078200 10.0kb upstream 10.0kb upstream 10000 false chr5: 33403288-33413287 Medicago truncatula
Medtr5g078200 10.0kb downstream 10.0kb downstream 14042 true chr5: 33413288-33427329 Medicago truncatula
Medtr5g078200 10.0kb downstream 10.0kb downstream 10000 false chr5: 33417330-33427329 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302850 5265 Fabidae View MSA
124063315 5270 Rosid View MSA
123741211 5271 Pentapetalae View MSA
122791300 5272 Eudicot View MSA
122043027 5273 Angiosperm View MSA
121351661 5274 Embryophyte View MSA
123382266 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low Low
cufflinks 0.084        
cufflinks 0.093        
cufflinks 0.187        
cufflinks 0.117        
cufflinks 0.102     Low  
cufflinks 0.245        
cufflinks 0.115        
cufflinks 0.465       High

0 Strain