Gene : Medtr5g078360 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12135 - DNA REPAIR PROTEIN XP-C / RAD4 Description:  DNA repair protein complementing xp-C cells-like protein
Genomic Order:  4319 Name:  ? Medtr5g078360
Secondary Identifier:  ? PAC:31085400
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g078360 0.5kb upstream 0.5kb upstream 8989 true chr5: 33499444-33508432 Medicago truncatula
Medtr5g078360 0.5kb upstream 0.5kb upstream 500 false chr5: 33507933-33508432 Medicago truncatula
Medtr5g078360 0.5kb downstream 0.5kb downstream 8989 true chr5: 33498944-33507932 Medicago truncatula
Medtr5g078360 0.5kb downstream 0.5kb downstream 500 false chr5: 33498944-33499443 Medicago truncatula
Medtr5g078360 1.0kb upstream 1.0kb upstream 9489 true chr5: 33499444-33508932 Medicago truncatula
Medtr5g078360 1.0kb upstream 1.0kb upstream 1000 false chr5: 33507933-33508932 Medicago truncatula
Medtr5g078360 1.0kb downstream 1.0kb downstream 9489 true chr5: 33498444-33507932 Medicago truncatula
Medtr5g078360 1.0kb downstream 1.0kb downstream 1000 false chr5: 33498444-33499443 Medicago truncatula
Medtr5g078360 2.0kb upstream 2.0kb upstream 10489 true chr5: 33499444-33509932 Medicago truncatula
Medtr5g078360 2.0kb upstream 2.0kb upstream 2000 false chr5: 33507933-33509932 Medicago truncatula
Medtr5g078360 2.0kb downstream 2.0kb downstream 10489 true chr5: 33497444-33507932 Medicago truncatula
Medtr5g078360 2.0kb downstream 2.0kb downstream 2000 false chr5: 33497444-33499443 Medicago truncatula
Medtr5g078360 5.0kb upstream 5.0kb upstream 13489 true chr5: 33499444-33512932 Medicago truncatula
Medtr5g078360 5.0kb upstream 5.0kb upstream 5000 false chr5: 33507933-33512932 Medicago truncatula
Medtr5g078360 5.0kb downstream 5.0kb downstream 13489 true chr5: 33494444-33507932 Medicago truncatula
Medtr5g078360 5.0kb downstream 5.0kb downstream 5000 false chr5: 33494444-33499443 Medicago truncatula
Medtr5g078360 10.0kb upstream 10.0kb upstream 18489 true chr5: 33499444-33517932 Medicago truncatula
Medtr5g078360 10.0kb upstream 10.0kb upstream 10000 false chr5: 33507933-33517932 Medicago truncatula
Medtr5g078360 10.0kb downstream 10.0kb downstream 18489 true chr5: 33489444-33507932 Medicago truncatula
Medtr5g078360 10.0kb downstream 10.0kb downstream 10000 false chr5: 33489444-33499443 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303800 5265 Fabidae View MSA
124051067 5270 Rosid View MSA
123738290 5271 Pentapetalae View MSA
122788160 5272 Eudicot View MSA
122049699 5273 Angiosperm View MSA
121347837 5274 Embryophyte View MSA
123425699 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.316        
cufflinks 0.827        
cufflinks 0.929        
cufflinks 0.081       Low
cufflinks 1.176       High
cufflinks 0.101     Low Low
cufflinks 0.248        
cufflinks 0.857        
cufflinks 0.163        

0 Strain