Gene : Medtr5g085170 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12802:SF44 - SWI/SNF COMPLEX SUBUNIT SWI3B Description:  SWI/SNF complex subunit SWI3B-like protein
Genomic Order:  4778 Name:  ? Medtr5g085170
Secondary Identifier:  ? PAC:31091993
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g085170 0.5kb upstream 0.5kb upstream 1802 true chr5: 36752174-36753975 Medicago truncatula
Medtr5g085170 0.5kb upstream 0.5kb upstream 500 false chr5: 36752174-36752673 Medicago truncatula
Medtr5g085170 0.5kb downstream 0.5kb downstream 1802 true chr5: 36752674-36754475 Medicago truncatula
Medtr5g085170 0.5kb downstream 0.5kb downstream 500 false chr5: 36753976-36754475 Medicago truncatula
Medtr5g085170 1.0kb upstream 1.0kb upstream 2302 true chr5: 36751674-36753975 Medicago truncatula
Medtr5g085170 1.0kb upstream 1.0kb upstream 1000 false chr5: 36751674-36752673 Medicago truncatula
Medtr5g085170 1.0kb downstream 1.0kb downstream 2302 true chr5: 36752674-36754975 Medicago truncatula
Medtr5g085170 1.0kb downstream 1.0kb downstream 1000 false chr5: 36753976-36754975 Medicago truncatula
Medtr5g085170 2.0kb upstream 2.0kb upstream 3302 true chr5: 36750674-36753975 Medicago truncatula
Medtr5g085170 2.0kb upstream 2.0kb upstream 2000 false chr5: 36750674-36752673 Medicago truncatula
Medtr5g085170 2.0kb downstream 2.0kb downstream 3302 true chr5: 36752674-36755975 Medicago truncatula
Medtr5g085170 2.0kb downstream 2.0kb downstream 2000 false chr5: 36753976-36755975 Medicago truncatula
Medtr5g085170 5.0kb upstream 5.0kb upstream 6302 true chr5: 36747674-36753975 Medicago truncatula
Medtr5g085170 5.0kb upstream 5.0kb upstream 5000 false chr5: 36747674-36752673 Medicago truncatula
Medtr5g085170 5.0kb downstream 5.0kb downstream 6302 true chr5: 36752674-36758975 Medicago truncatula
Medtr5g085170 5.0kb downstream 5.0kb downstream 5000 false chr5: 36753976-36758975 Medicago truncatula
Medtr5g085170 10.0kb upstream 10.0kb upstream 11302 true chr5: 36742674-36753975 Medicago truncatula
Medtr5g085170 10.0kb upstream 10.0kb upstream 10000 false chr5: 36742674-36752673 Medicago truncatula
Medtr5g085170 10.0kb downstream 10.0kb downstream 11302 true chr5: 36752674-36763975 Medicago truncatula
Medtr5g085170 10.0kb downstream 10.0kb downstream 10000 false chr5: 36753976-36763975 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306144 5265 Fabidae View MSA
124066974 5270 Rosid View MSA
123739731 5271 Pentapetalae View MSA
122790085 5272 Eudicot View MSA
122046866 5273 Angiosperm View MSA
121349753 5274 Embryophyte View MSA
123381428 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.329       Low
cufflinks 0.412        
cufflinks 0.662        
cufflinks 0.439        
cufflinks 0.812       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.384        
cufflinks 0.675        
cufflinks 0.496        

0 Strain