Gene : Medtr4g131190 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12775 - PROTEIN C20ORF43 HOMOLOG Description:  replication termination factor 2
Genomic Order:  7031 Name:  ? Medtr4g131190
Secondary Identifier:  ? PAC:31113584
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g131190 0.5kb upstream 0.5kb upstream 3211 true chr4: 54735807-54739017 Medicago truncatula
Medtr4g131190 0.5kb upstream 0.5kb upstream 500 false chr4: 54735807-54736306 Medicago truncatula
Medtr4g131190 0.5kb downstream 0.5kb downstream 3211 true chr4: 54736307-54739517 Medicago truncatula
Medtr4g131190 0.5kb downstream 0.5kb downstream 500 false chr4: 54739018-54739517 Medicago truncatula
Medtr4g131190 1.0kb upstream 1.0kb upstream 3711 true chr4: 54735307-54739017 Medicago truncatula
Medtr4g131190 1.0kb upstream 1.0kb upstream 1000 false chr4: 54735307-54736306 Medicago truncatula
Medtr4g131190 1.0kb downstream 1.0kb downstream 3711 true chr4: 54736307-54740017 Medicago truncatula
Medtr4g131190 1.0kb downstream 1.0kb downstream 1000 false chr4: 54739018-54740017 Medicago truncatula
Medtr4g131190 2.0kb upstream 2.0kb upstream 4711 true chr4: 54734307-54739017 Medicago truncatula
Medtr4g131190 2.0kb upstream 2.0kb upstream 2000 false chr4: 54734307-54736306 Medicago truncatula
Medtr4g131190 2.0kb downstream 2.0kb downstream 4711 true chr4: 54736307-54741017 Medicago truncatula
Medtr4g131190 2.0kb downstream 2.0kb downstream 2000 false chr4: 54739018-54741017 Medicago truncatula
Medtr4g131190 5.0kb upstream 5.0kb upstream 7711 true chr4: 54731307-54739017 Medicago truncatula
Medtr4g131190 5.0kb upstream 5.0kb upstream 5000 false chr4: 54731307-54736306 Medicago truncatula
Medtr4g131190 5.0kb downstream 5.0kb downstream 7711 true chr4: 54736307-54744017 Medicago truncatula
Medtr4g131190 5.0kb downstream 5.0kb downstream 5000 false chr4: 54739018-54744017 Medicago truncatula
Medtr4g131190 10.0kb upstream 10.0kb upstream 12711 true chr4: 54726307-54739017 Medicago truncatula
Medtr4g131190 10.0kb upstream 10.0kb upstream 10000 false chr4: 54726307-54736306 Medicago truncatula
Medtr4g131190 10.0kb downstream 10.0kb downstream 12711 true chr4: 54736307-54749017 Medicago truncatula
Medtr4g131190 10.0kb downstream 10.0kb downstream 10000 false chr4: 54739018-54749017 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308220 5265 Fabidae View MSA
124066786 5270 Rosid View MSA
123747269 5271 Pentapetalae View MSA
122787080 5272 Eudicot View MSA
122046209 5273 Angiosperm View MSA
121350063 5274 Embryophyte View MSA
123426844 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.243     High  
cufflinks 10.263     High  
cufflinks 10.898     High  
cufflinks 8.868        
cufflinks 10.127        
cufflinks 3.766       Low
cufflinks 9.884        
cufflinks 8.751        
cufflinks 12.638     High  

0 Strain