Gene : Medtr4g097580 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31908:SF2 - NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Description:  nuclear matrix constituent-like protein, putative
Genomic Order:  5101 Name:  ? Medtr4g097580
Secondary Identifier:  ? PAC:31111833
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g097580 0.5kb upstream 0.5kb upstream 7227 true chr4: 40262512-40269738 Medicago truncatula
Medtr4g097580 0.5kb upstream 0.5kb upstream 500 false chr4: 40269239-40269738 Medicago truncatula
Medtr4g097580 0.5kb downstream 0.5kb downstream 7227 true chr4: 40262012-40269238 Medicago truncatula
Medtr4g097580 0.5kb downstream 0.5kb downstream 500 false chr4: 40262012-40262511 Medicago truncatula
Medtr4g097580 1.0kb upstream 1.0kb upstream 7727 true chr4: 40262512-40270238 Medicago truncatula
Medtr4g097580 1.0kb upstream 1.0kb upstream 1000 false chr4: 40269239-40270238 Medicago truncatula
Medtr4g097580 1.0kb downstream 1.0kb downstream 7727 true chr4: 40261512-40269238 Medicago truncatula
Medtr4g097580 1.0kb downstream 1.0kb downstream 1000 false chr4: 40261512-40262511 Medicago truncatula
Medtr4g097580 2.0kb upstream 2.0kb upstream 8727 true chr4: 40262512-40271238 Medicago truncatula
Medtr4g097580 2.0kb upstream 2.0kb upstream 2000 false chr4: 40269239-40271238 Medicago truncatula
Medtr4g097580 2.0kb downstream 2.0kb downstream 8727 true chr4: 40260512-40269238 Medicago truncatula
Medtr4g097580 2.0kb downstream 2.0kb downstream 2000 false chr4: 40260512-40262511 Medicago truncatula
Medtr4g097580 5.0kb upstream 5.0kb upstream 11727 true chr4: 40262512-40274238 Medicago truncatula
Medtr4g097580 5.0kb upstream 5.0kb upstream 5000 false chr4: 40269239-40274238 Medicago truncatula
Medtr4g097580 5.0kb downstream 5.0kb downstream 11727 true chr4: 40257512-40269238 Medicago truncatula
Medtr4g097580 5.0kb downstream 5.0kb downstream 5000 false chr4: 40257512-40262511 Medicago truncatula
Medtr4g097580 10.0kb upstream 10.0kb upstream 16727 true chr4: 40262512-40279238 Medicago truncatula
Medtr4g097580 10.0kb upstream 10.0kb upstream 10000 false chr4: 40269239-40279238 Medicago truncatula
Medtr4g097580 10.0kb downstream 10.0kb downstream 16727 true chr4: 40252512-40269238 Medicago truncatula
Medtr4g097580 10.0kb downstream 10.0kb downstream 10000 false chr4: 40252512-40262511 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306162 5265 Fabidae View MSA
124068788 5270 Rosid View MSA
123740792 5271 Pentapetalae View MSA
122790412 5272 Eudicot View MSA
122047030 5273 Angiosperm View MSA
121346070 5274 Embryophyte View MSA
123380319 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.534     High  
cufflinks 11.85     High  
cufflinks 11.699     High  
cufflinks 2.673       Low
cufflinks 15.201     High High
cufflinks 3.917        
cufflinks 5.617        
cufflinks 10.054     High  
cufflinks 3.282       Low

0 Strain