Gene : Medtr4g097110 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22925 - GLYCOSYL HYDROLASE 43 FAMILY MEMBER Description:  glycosyl hydrolase family 43 protein
Genomic Order:  5069 Name:  ? Medtr4g097110
Secondary Identifier:  ? PAC:31110822
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g097110 0.5kb upstream 0.5kb upstream 3183 true chr4: 40006901-40010083 Medicago truncatula
Medtr4g097110 0.5kb upstream 0.5kb upstream 500 false chr4: 40009584-40010083 Medicago truncatula
Medtr4g097110 0.5kb downstream 0.5kb downstream 3183 true chr4: 40006401-40009583 Medicago truncatula
Medtr4g097110 0.5kb downstream 0.5kb downstream 500 false chr4: 40006401-40006900 Medicago truncatula
Medtr4g097110 1.0kb upstream 1.0kb upstream 3683 true chr4: 40006901-40010583 Medicago truncatula
Medtr4g097110 1.0kb upstream 1.0kb upstream 1000 false chr4: 40009584-40010583 Medicago truncatula
Medtr4g097110 1.0kb downstream 1.0kb downstream 3683 true chr4: 40005901-40009583 Medicago truncatula
Medtr4g097110 1.0kb downstream 1.0kb downstream 1000 false chr4: 40005901-40006900 Medicago truncatula
Medtr4g097110 2.0kb upstream 2.0kb upstream 4683 true chr4: 40006901-40011583 Medicago truncatula
Medtr4g097110 2.0kb upstream 2.0kb upstream 2000 false chr4: 40009584-40011583 Medicago truncatula
Medtr4g097110 2.0kb downstream 2.0kb downstream 4683 true chr4: 40004901-40009583 Medicago truncatula
Medtr4g097110 2.0kb downstream 2.0kb downstream 2000 false chr4: 40004901-40006900 Medicago truncatula
Medtr4g097110 5.0kb upstream 5.0kb upstream 7683 true chr4: 40006901-40014583 Medicago truncatula
Medtr4g097110 5.0kb upstream 5.0kb upstream 5000 false chr4: 40009584-40014583 Medicago truncatula
Medtr4g097110 5.0kb downstream 5.0kb downstream 7683 true chr4: 40001901-40009583 Medicago truncatula
Medtr4g097110 5.0kb downstream 5.0kb downstream 5000 false chr4: 40001901-40006900 Medicago truncatula
Medtr4g097110 10.0kb upstream 10.0kb upstream 12683 true chr4: 40006901-40019583 Medicago truncatula
Medtr4g097110 10.0kb upstream 10.0kb upstream 10000 false chr4: 40009584-40019583 Medicago truncatula
Medtr4g097110 10.0kb downstream 10.0kb downstream 12683 true chr4: 39996901-40009583 Medicago truncatula
Medtr4g097110 10.0kb downstream 10.0kb downstream 10000 false chr4: 39996901-40006900 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121654817 5273 Angiosperm View MSA
122294613 5265 Fabidae View MSA
124034474 5270 Rosid View MSA
123608108 5271 Pentapetalae View MSA
122642773 5272 Eudicot View MSA
120926920 5274 Embryophyte View MSA
122967569 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.69        
cufflinks 0.109       Low
cufflinks 0.234        
cufflinks 0.504        
cufflinks 0.26        
cufflinks 0.255        
cufflinks 0.764       High
cufflinks 0.106       Low
cufflinks 0.93       High

0 Strain