Gene : Medtr3g104940 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31618:SF3 - MECHANOSENSITIVE ION CHANNEL PROTEIN 10-RELATED Description:  mechanosensitive ion channel family protein
Genomic Order:  5785 Name:  ? Medtr3g104940
Secondary Identifier:  ? PAC:31059733
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g104940 0.5kb upstream 0.5kb upstream 3981 true chr3: 48382037-48386017 Medicago truncatula
Medtr3g104940 0.5kb upstream 0.5kb upstream 500 false chr3: 48382037-48382536 Medicago truncatula
Medtr3g104940 0.5kb downstream 0.5kb downstream 3981 true chr3: 48382537-48386517 Medicago truncatula
Medtr3g104940 0.5kb downstream 0.5kb downstream 500 false chr3: 48386018-48386517 Medicago truncatula
Medtr3g104940 1.0kb upstream 1.0kb upstream 4481 true chr3: 48381537-48386017 Medicago truncatula
Medtr3g104940 1.0kb upstream 1.0kb upstream 1000 false chr3: 48381537-48382536 Medicago truncatula
Medtr3g104940 1.0kb downstream 1.0kb downstream 4481 true chr3: 48382537-48387017 Medicago truncatula
Medtr3g104940 1.0kb downstream 1.0kb downstream 1000 false chr3: 48386018-48387017 Medicago truncatula
Medtr3g104940 2.0kb upstream 2.0kb upstream 5481 true chr3: 48380537-48386017 Medicago truncatula
Medtr3g104940 2.0kb upstream 2.0kb upstream 2000 false chr3: 48380537-48382536 Medicago truncatula
Medtr3g104940 2.0kb downstream 2.0kb downstream 5481 true chr3: 48382537-48388017 Medicago truncatula
Medtr3g104940 2.0kb downstream 2.0kb downstream 2000 false chr3: 48386018-48388017 Medicago truncatula
Medtr3g104940 5.0kb upstream 5.0kb upstream 8481 true chr3: 48377537-48386017 Medicago truncatula
Medtr3g104940 5.0kb upstream 5.0kb upstream 5000 false chr3: 48377537-48382536 Medicago truncatula
Medtr3g104940 5.0kb downstream 5.0kb downstream 8481 true chr3: 48382537-48391017 Medicago truncatula
Medtr3g104940 5.0kb downstream 5.0kb downstream 5000 false chr3: 48386018-48391017 Medicago truncatula
Medtr3g104940 10.0kb upstream 10.0kb upstream 13481 true chr3: 48372537-48386017 Medicago truncatula
Medtr3g104940 10.0kb upstream 10.0kb upstream 10000 false chr3: 48372537-48382536 Medicago truncatula
Medtr3g104940 10.0kb downstream 10.0kb downstream 13481 true chr3: 48382537-48396017 Medicago truncatula
Medtr3g104940 10.0kb downstream 10.0kb downstream 10000 false chr3: 48386018-48396017 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122316685 5265 Fabidae View MSA
124052589 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.085        
cufflinks 8.226       High
cufflinks 4.808        
cufflinks 5.677        
cufflinks 5.159        
cufflinks 3.782       Low
cufflinks 8.101       High
cufflinks 5.989        
cufflinks 3.198       Low

0 Strain