Gene : Medtr3g088525 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG4615 - Uncharacterized conserved protein Description:  keratinocytes-associated protein
Genomic Order:  4696 Name:  ? Medtr3g088525
Secondary Identifier:  ? PAC:31060501
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088525 0.5kb upstream 0.5kb upstream 4311 true chr3: 40237608-40241918 Medicago truncatula
Medtr3g088525 0.5kb upstream 0.5kb upstream 500 false chr3: 40241419-40241918 Medicago truncatula
Medtr3g088525 0.5kb downstream 0.5kb downstream 4311 true chr3: 40237108-40241418 Medicago truncatula
Medtr3g088525 0.5kb downstream 0.5kb downstream 500 false chr3: 40237108-40237607 Medicago truncatula
Medtr3g088525 1.0kb upstream 1.0kb upstream 4811 true chr3: 40237608-40242418 Medicago truncatula
Medtr3g088525 1.0kb upstream 1.0kb upstream 1000 false chr3: 40241419-40242418 Medicago truncatula
Medtr3g088525 1.0kb downstream 1.0kb downstream 4811 true chr3: 40236608-40241418 Medicago truncatula
Medtr3g088525 1.0kb downstream 1.0kb downstream 1000 false chr3: 40236608-40237607 Medicago truncatula
Medtr3g088525 2.0kb upstream 2.0kb upstream 5811 true chr3: 40237608-40243418 Medicago truncatula
Medtr3g088525 2.0kb upstream 2.0kb upstream 2000 false chr3: 40241419-40243418 Medicago truncatula
Medtr3g088525 2.0kb downstream 2.0kb downstream 5811 true chr3: 40235608-40241418 Medicago truncatula
Medtr3g088525 2.0kb downstream 2.0kb downstream 2000 false chr3: 40235608-40237607 Medicago truncatula
Medtr3g088525 5.0kb upstream 5.0kb upstream 8811 true chr3: 40237608-40246418 Medicago truncatula
Medtr3g088525 5.0kb upstream 5.0kb upstream 5000 false chr3: 40241419-40246418 Medicago truncatula
Medtr3g088525 5.0kb downstream 5.0kb downstream 8811 true chr3: 40232608-40241418 Medicago truncatula
Medtr3g088525 5.0kb downstream 5.0kb downstream 5000 false chr3: 40232608-40237607 Medicago truncatula
Medtr3g088525 10.0kb upstream 10.0kb upstream 13811 true chr3: 40237608-40251418 Medicago truncatula
Medtr3g088525 10.0kb upstream 10.0kb upstream 10000 false chr3: 40241419-40251418 Medicago truncatula
Medtr3g088525 10.0kb downstream 10.0kb downstream 13811 true chr3: 40227608-40241418 Medicago truncatula
Medtr3g088525 10.0kb downstream 10.0kb downstream 10000 false chr3: 40227608-40237607 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305106 5265 Fabidae View MSA
124067674 5270 Rosid View MSA
123737337 5271 Pentapetalae View MSA
122792320 5272 Eudicot View MSA
122045575 5273 Angiosperm View MSA
121346105 5274 Embryophyte View MSA
123380331 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.669        
cufflinks 3.454        
cufflinks 2.767        
cufflinks 11.779     High High
cufflinks 3.388        
cufflinks 7.645        
cufflinks 6.924        
cufflinks 2.295       Low
cufflinks 9.347       High

0 Strain