Gene : Medtr3g040680 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31956:SF10 - NON-SPECIFIC PHOSPHOLIPASE C2 Description:  non-specific phospholipase C4
Genomic Order:  1610 Name:  ? Medtr3g040680
Secondary Identifier:  ? PAC:31058524
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g040680 0.5kb upstream 0.5kb upstream 5836 true chr3: 14337780-14343615 Medicago truncatula
Medtr3g040680 0.5kb upstream 0.5kb upstream 500 false chr3: 14343116-14343615 Medicago truncatula
Medtr3g040680 0.5kb downstream 0.5kb downstream 5836 true chr3: 14337280-14343115 Medicago truncatula
Medtr3g040680 0.5kb downstream 0.5kb downstream 500 false chr3: 14337280-14337779 Medicago truncatula
Medtr3g040680 1.0kb upstream 1.0kb upstream 6336 true chr3: 14337780-14344115 Medicago truncatula
Medtr3g040680 1.0kb upstream 1.0kb upstream 1000 false chr3: 14343116-14344115 Medicago truncatula
Medtr3g040680 1.0kb downstream 1.0kb downstream 6336 true chr3: 14336780-14343115 Medicago truncatula
Medtr3g040680 1.0kb downstream 1.0kb downstream 1000 false chr3: 14336780-14337779 Medicago truncatula
Medtr3g040680 2.0kb upstream 2.0kb upstream 7336 true chr3: 14337780-14345115 Medicago truncatula
Medtr3g040680 2.0kb upstream 2.0kb upstream 2000 false chr3: 14343116-14345115 Medicago truncatula
Medtr3g040680 2.0kb downstream 2.0kb downstream 7336 true chr3: 14335780-14343115 Medicago truncatula
Medtr3g040680 2.0kb downstream 2.0kb downstream 2000 false chr3: 14335780-14337779 Medicago truncatula
Medtr3g040680 5.0kb upstream 5.0kb upstream 10336 true chr3: 14337780-14348115 Medicago truncatula
Medtr3g040680 5.0kb upstream 5.0kb upstream 5000 false chr3: 14343116-14348115 Medicago truncatula
Medtr3g040680 5.0kb downstream 5.0kb downstream 10336 true chr3: 14332780-14343115 Medicago truncatula
Medtr3g040680 5.0kb downstream 5.0kb downstream 5000 false chr3: 14332780-14337779 Medicago truncatula
Medtr3g040680 10.0kb upstream 10.0kb upstream 15336 true chr3: 14337780-14353115 Medicago truncatula
Medtr3g040680 10.0kb upstream 10.0kb upstream 10000 false chr3: 14343116-14353115 Medicago truncatula
Medtr3g040680 10.0kb downstream 10.0kb downstream 15336 true chr3: 14327780-14343115 Medicago truncatula
Medtr3g040680 10.0kb downstream 10.0kb downstream 10000 false chr3: 14327780-14337779 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302706 5265 Fabidae View MSA
124069439 5270 Rosid View MSA
123747870 5271 Pentapetalae View MSA
122794639 5272 Eudicot View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.107        
cufflinks 0.471        
cufflinks 0.586        
cufflinks 0.03     Low Low
cufflinks 1.159       High
cufflinks 0.069     Low  
cufflinks 0.082        
cufflinks 0.501        
cufflinks 0.014     Low Low

0 Strain