Gene : Medtr2g100130 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11668:SF21 - SERINE/THREONINE-PROTEIN PHOSPHATASE 5 Description:  serine/threonine-protein phosphatase PP1
Genomic Order:  5469 Name:  ? Medtr2g100130
Secondary Identifier:  ? PAC:31062724
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g100130 0.5kb upstream 0.5kb upstream 6161 true chr2: 42995349-43001509 Medicago truncatula
Medtr2g100130 0.5kb upstream 0.5kb upstream 500 false chr2: 42995349-42995848 Medicago truncatula
Medtr2g100130 0.5kb downstream 0.5kb downstream 6161 true chr2: 42995849-43002009 Medicago truncatula
Medtr2g100130 0.5kb downstream 0.5kb downstream 500 false chr2: 43001510-43002009 Medicago truncatula
Medtr2g100130 1.0kb upstream 1.0kb upstream 6661 true chr2: 42994849-43001509 Medicago truncatula
Medtr2g100130 1.0kb upstream 1.0kb upstream 1000 false chr2: 42994849-42995848 Medicago truncatula
Medtr2g100130 1.0kb downstream 1.0kb downstream 6661 true chr2: 42995849-43002509 Medicago truncatula
Medtr2g100130 1.0kb downstream 1.0kb downstream 1000 false chr2: 43001510-43002509 Medicago truncatula
Medtr2g100130 2.0kb upstream 2.0kb upstream 7661 true chr2: 42993849-43001509 Medicago truncatula
Medtr2g100130 2.0kb upstream 2.0kb upstream 2000 false chr2: 42993849-42995848 Medicago truncatula
Medtr2g100130 2.0kb downstream 2.0kb downstream 7661 true chr2: 42995849-43003509 Medicago truncatula
Medtr2g100130 2.0kb downstream 2.0kb downstream 2000 false chr2: 43001510-43003509 Medicago truncatula
Medtr2g100130 5.0kb upstream 5.0kb upstream 10661 true chr2: 42990849-43001509 Medicago truncatula
Medtr2g100130 5.0kb upstream 5.0kb upstream 5000 false chr2: 42990849-42995848 Medicago truncatula
Medtr2g100130 5.0kb downstream 5.0kb downstream 10661 true chr2: 42995849-43006509 Medicago truncatula
Medtr2g100130 5.0kb downstream 5.0kb downstream 5000 false chr2: 43001510-43006509 Medicago truncatula
Medtr2g100130 10.0kb upstream 10.0kb upstream 15661 true chr2: 42985849-43001509 Medicago truncatula
Medtr2g100130 10.0kb upstream 10.0kb upstream 10000 false chr2: 42985849-42995848 Medicago truncatula
Medtr2g100130 10.0kb downstream 10.0kb downstream 15661 true chr2: 42995849-43011509 Medicago truncatula
Medtr2g100130 10.0kb downstream 10.0kb downstream 10000 false chr2: 43001510-43011509 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316356 5265 Fabidae View MSA
124073155 5270 Rosid View MSA
123745006 5271 Pentapetalae View MSA
122789441 5272 Eudicot View MSA
122043286 5273 Angiosperm View MSA
123429115 5275 Viridiplantae View MSA
121344661 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.131        
cufflinks 0.203        
cufflinks 0.174        
cufflinks 0.019     Low Low
cufflinks 0.275       High
cufflinks 0.015     Low Low
cufflinks 0.065     Low  
cufflinks 0.148        
cufflinks 0.054     Low  

0 Strain