Gene : Medtr1g112920 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10527:SF3 - FI21453P1 Description:  transportin-1 protein
Genomic Order:  6446 Name:  ? Medtr1g112920
Secondary Identifier:  ? PAC:31094314
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g112920 0.5kb upstream 0.5kb upstream 14808 true chr1: 51202369-51217176 Medicago truncatula
Medtr1g112920 0.5kb upstream 0.5kb upstream 500 false chr1: 51202369-51202868 Medicago truncatula
Medtr1g112920 0.5kb downstream 0.5kb downstream 14808 true chr1: 51202869-51217676 Medicago truncatula
Medtr1g112920 0.5kb downstream 0.5kb downstream 500 false chr1: 51217177-51217676 Medicago truncatula
Medtr1g112920 1.0kb upstream 1.0kb upstream 15308 true chr1: 51201869-51217176 Medicago truncatula
Medtr1g112920 1.0kb upstream 1.0kb upstream 1000 false chr1: 51201869-51202868 Medicago truncatula
Medtr1g112920 1.0kb downstream 1.0kb downstream 15308 true chr1: 51202869-51218176 Medicago truncatula
Medtr1g112920 1.0kb downstream 1.0kb downstream 1000 false chr1: 51217177-51218176 Medicago truncatula
Medtr1g112920 2.0kb upstream 2.0kb upstream 16308 true chr1: 51200869-51217176 Medicago truncatula
Medtr1g112920 2.0kb upstream 2.0kb upstream 2000 false chr1: 51200869-51202868 Medicago truncatula
Medtr1g112920 2.0kb downstream 2.0kb downstream 16308 true chr1: 51202869-51219176 Medicago truncatula
Medtr1g112920 2.0kb downstream 2.0kb downstream 2000 false chr1: 51217177-51219176 Medicago truncatula
Medtr1g112920 5.0kb upstream 5.0kb upstream 19308 true chr1: 51197869-51217176 Medicago truncatula
Medtr1g112920 5.0kb upstream 5.0kb upstream 5000 false chr1: 51197869-51202868 Medicago truncatula
Medtr1g112920 5.0kb downstream 5.0kb downstream 19308 true chr1: 51202869-51222176 Medicago truncatula
Medtr1g112920 5.0kb downstream 5.0kb downstream 5000 false chr1: 51217177-51222176 Medicago truncatula
Medtr1g112920 10.0kb upstream 10.0kb upstream 24308 true chr1: 51192869-51217176 Medicago truncatula
Medtr1g112920 10.0kb upstream 10.0kb upstream 10000 false chr1: 51192869-51202868 Medicago truncatula
Medtr1g112920 10.0kb downstream 10.0kb downstream 24308 true chr1: 51202869-51227176 Medicago truncatula
Medtr1g112920 10.0kb downstream 10.0kb downstream 10000 false chr1: 51217177-51227176 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026329 5273 Angiosperm View MSA
122304393 5265 Fabidae View MSA
124064274 5270 Rosid View MSA
123739927 5271 Pentapetalae View MSA
122787120 5272 Eudicot View MSA
121344720 5274 Embryophyte View MSA
123426345 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.962        
cufflinks 1.045        
cufflinks 0.929        
cufflinks 0.41       Low
cufflinks 1.567       High
cufflinks 0.239       Low
cufflinks 0.626        
cufflinks 0.867        
cufflinks 0.962        

0 Strain