Gene : Medtr2g013980 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15696:SF3 - PROTEIN SMG7L Description:  telomerase activating protein Est1
Genomic Order:  572 Name:  ? Medtr2g013980
Secondary Identifier:  ? PAC:31062144
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g013980 0.5kb upstream 0.5kb upstream 7396 true chr2: 3858901-3866296 Medicago truncatula
Medtr2g013980 0.5kb upstream 0.5kb upstream 500 false chr2: 3858901-3859400 Medicago truncatula
Medtr2g013980 0.5kb downstream 0.5kb downstream 7396 true chr2: 3859401-3866796 Medicago truncatula
Medtr2g013980 0.5kb downstream 0.5kb downstream 500 false chr2: 3866297-3866796 Medicago truncatula
Medtr2g013980 1.0kb upstream 1.0kb upstream 7896 true chr2: 3858401-3866296 Medicago truncatula
Medtr2g013980 1.0kb upstream 1.0kb upstream 1000 false chr2: 3858401-3859400 Medicago truncatula
Medtr2g013980 1.0kb downstream 1.0kb downstream 7896 true chr2: 3859401-3867296 Medicago truncatula
Medtr2g013980 1.0kb downstream 1.0kb downstream 1000 false chr2: 3866297-3867296 Medicago truncatula
Medtr2g013980 2.0kb upstream 2.0kb upstream 8896 true chr2: 3857401-3866296 Medicago truncatula
Medtr2g013980 2.0kb upstream 2.0kb upstream 2000 false chr2: 3857401-3859400 Medicago truncatula
Medtr2g013980 2.0kb downstream 2.0kb downstream 8896 true chr2: 3859401-3868296 Medicago truncatula
Medtr2g013980 2.0kb downstream 2.0kb downstream 2000 false chr2: 3866297-3868296 Medicago truncatula
Medtr2g013980 5.0kb upstream 5.0kb upstream 11896 true chr2: 3854401-3866296 Medicago truncatula
Medtr2g013980 5.0kb upstream 5.0kb upstream 5000 false chr2: 3854401-3859400 Medicago truncatula
Medtr2g013980 5.0kb downstream 5.0kb downstream 11896 true chr2: 3859401-3871296 Medicago truncatula
Medtr2g013980 5.0kb downstream 5.0kb downstream 5000 false chr2: 3866297-3871296 Medicago truncatula
Medtr2g013980 10.0kb upstream 10.0kb upstream 16896 true chr2: 3849401-3866296 Medicago truncatula
Medtr2g013980 10.0kb upstream 10.0kb upstream 10000 false chr2: 3849401-3859400 Medicago truncatula
Medtr2g013980 10.0kb downstream 10.0kb downstream 16896 true chr2: 3859401-3876296 Medicago truncatula
Medtr2g013980 10.0kb downstream 10.0kb downstream 10000 false chr2: 3866297-3876296 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300747 5265 Fabidae View MSA
124050275 5270 Rosid View MSA
123740560 5271 Pentapetalae View MSA
122792675 5272 Eudicot View MSA
122043425 5273 Angiosperm View MSA
121310120 5274 Embryophyte View MSA
123426231 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.338       Low
cufflinks 1.115        
cufflinks 1.723       High
cufflinks 0.447        
cufflinks 0.892        
cufflinks 0.268       Low
cufflinks 0.731        
cufflinks 1.531       High
cufflinks 0.494        

0 Strain