Gene : Medtr1g080420 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10799:SF350 - TRANSCRIPTIONAL REGULATOR ATRX HOMOLOG Description:  chromatin remodeling complex subunit
Genomic Order:  4375 Name:  ? Medtr1g080420
Secondary Identifier:  ? PAC:31094583
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g080420 0.5kb upstream 0.5kb upstream 34806 true chr1: 35726804-35761609 Medicago truncatula
Medtr1g080420 0.5kb upstream 0.5kb upstream 500 false chr1: 35761110-35761609 Medicago truncatula
Medtr1g080420 0.5kb downstream 0.5kb downstream 34806 true chr1: 35726304-35761109 Medicago truncatula
Medtr1g080420 0.5kb downstream 0.5kb downstream 500 false chr1: 35726304-35726803 Medicago truncatula
Medtr1g080420 1.0kb upstream 1.0kb upstream 35306 true chr1: 35726804-35762109 Medicago truncatula
Medtr1g080420 1.0kb upstream 1.0kb upstream 1000 false chr1: 35761110-35762109 Medicago truncatula
Medtr1g080420 1.0kb downstream 1.0kb downstream 35306 true chr1: 35725804-35761109 Medicago truncatula
Medtr1g080420 1.0kb downstream 1.0kb downstream 1000 false chr1: 35725804-35726803 Medicago truncatula
Medtr1g080420 2.0kb upstream 2.0kb upstream 36306 true chr1: 35726804-35763109 Medicago truncatula
Medtr1g080420 2.0kb upstream 2.0kb upstream 2000 false chr1: 35761110-35763109 Medicago truncatula
Medtr1g080420 2.0kb downstream 2.0kb downstream 36306 true chr1: 35724804-35761109 Medicago truncatula
Medtr1g080420 2.0kb downstream 2.0kb downstream 2000 false chr1: 35724804-35726803 Medicago truncatula
Medtr1g080420 5.0kb upstream 5.0kb upstream 39306 true chr1: 35726804-35766109 Medicago truncatula
Medtr1g080420 5.0kb upstream 5.0kb upstream 5000 false chr1: 35761110-35766109 Medicago truncatula
Medtr1g080420 5.0kb downstream 5.0kb downstream 39306 true chr1: 35721804-35761109 Medicago truncatula
Medtr1g080420 5.0kb downstream 5.0kb downstream 5000 false chr1: 35721804-35726803 Medicago truncatula
Medtr1g080420 10.0kb upstream 10.0kb upstream 44306 true chr1: 35726804-35771109 Medicago truncatula
Medtr1g080420 10.0kb upstream 10.0kb upstream 10000 false chr1: 35761110-35771109 Medicago truncatula
Medtr1g080420 10.0kb downstream 10.0kb downstream 44306 true chr1: 35716804-35761109 Medicago truncatula
Medtr1g080420 10.0kb downstream 10.0kb downstream 10000 false chr1: 35716804-35726803 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307297 5265 Fabidae View MSA
124061145 5270 Rosid View MSA
123747129 5271 Pentapetalae View MSA
122792246 5272 Eudicot View MSA
122043506 5273 Angiosperm View MSA
121348350 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.466        
cufflinks 0.602        
cufflinks 0.531        
cufflinks 0.111       Low
cufflinks 0.791       High
cufflinks 0.145       Low
cufflinks 0.253        
cufflinks 0.482        
cufflinks 0.183        

0 Strain