Gene : Medtr1g079767 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12686 - 3'-5' EXORIBONUCLEASE CSL4-RELATED Description:  nucleic acid-binding, OB-fold-like protein
Genomic Order:  4334 Name:  ? Medtr1g079767
Secondary Identifier:  ? PAC:31095621
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g079767 0.5kb upstream 0.5kb upstream 4321 true chr1: 35424462-35428782 Medicago truncatula
Medtr1g079767 0.5kb upstream 0.5kb upstream 500 false chr1: 35428283-35428782 Medicago truncatula
Medtr1g079767 0.5kb downstream 0.5kb downstream 4321 true chr1: 35423962-35428282 Medicago truncatula
Medtr1g079767 0.5kb downstream 0.5kb downstream 500 false chr1: 35423962-35424461 Medicago truncatula
Medtr1g079767 1.0kb upstream 1.0kb upstream 4821 true chr1: 35424462-35429282 Medicago truncatula
Medtr1g079767 1.0kb upstream 1.0kb upstream 1000 false chr1: 35428283-35429282 Medicago truncatula
Medtr1g079767 1.0kb downstream 1.0kb downstream 4821 true chr1: 35423462-35428282 Medicago truncatula
Medtr1g079767 1.0kb downstream 1.0kb downstream 1000 false chr1: 35423462-35424461 Medicago truncatula
Medtr1g079767 2.0kb upstream 2.0kb upstream 5821 true chr1: 35424462-35430282 Medicago truncatula
Medtr1g079767 2.0kb upstream 2.0kb upstream 2000 false chr1: 35428283-35430282 Medicago truncatula
Medtr1g079767 2.0kb downstream 2.0kb downstream 5821 true chr1: 35422462-35428282 Medicago truncatula
Medtr1g079767 2.0kb downstream 2.0kb downstream 2000 false chr1: 35422462-35424461 Medicago truncatula
Medtr1g079767 5.0kb upstream 5.0kb upstream 8821 true chr1: 35424462-35433282 Medicago truncatula
Medtr1g079767 5.0kb upstream 5.0kb upstream 5000 false chr1: 35428283-35433282 Medicago truncatula
Medtr1g079767 5.0kb downstream 5.0kb downstream 8821 true chr1: 35419462-35428282 Medicago truncatula
Medtr1g079767 5.0kb downstream 5.0kb downstream 5000 false chr1: 35419462-35424461 Medicago truncatula
Medtr1g079767 10.0kb upstream 10.0kb upstream 13821 true chr1: 35424462-35438282 Medicago truncatula
Medtr1g079767 10.0kb upstream 10.0kb upstream 10000 false chr1: 35428283-35438282 Medicago truncatula
Medtr1g079767 10.0kb downstream 10.0kb downstream 13821 true chr1: 35414462-35428282 Medicago truncatula
Medtr1g079767 10.0kb downstream 10.0kb downstream 10000 false chr1: 35414462-35424461 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026382 5273 Angiosperm View MSA
122256248 5265 Fabidae Singleton cluster - no MSA
124065404 5270 Rosid View MSA
123740453 5271 Pentapetalae View MSA
122786772 5272 Eudicot View MSA
121347552 5274 Embryophyte View MSA
123423947 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.301        
cufflinks 1.416        
cufflinks 1.35        
cufflinks 1.62        
cufflinks 2.096       High
cufflinks 0.65       Low
cufflinks 1.568        
cufflinks 1.248        
cufflinks 1.853        

0 Strain