Gene : Medtr1g067150 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22957:SF328 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Description:  RabGAP/TBC domain protein
Genomic Order:  3482 Name:  ? Medtr1g067150
Secondary Identifier:  ? PAC:31093222
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6842 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g067150 0.5kb upstream 0.5kb upstream 15625 true chr1: 28895794-28911418 Medicago truncatula
Medtr1g067150 0.5kb upstream 0.5kb upstream 500 false chr1: 28910919-28911418 Medicago truncatula
Medtr1g067150 0.5kb downstream 0.5kb downstream 15625 true chr1: 28895294-28910918 Medicago truncatula
Medtr1g067150 0.5kb downstream 0.5kb downstream 500 false chr1: 28895294-28895793 Medicago truncatula
Medtr1g067150 1.0kb upstream 1.0kb upstream 16125 true chr1: 28895794-28911918 Medicago truncatula
Medtr1g067150 1.0kb upstream 1.0kb upstream 1000 false chr1: 28910919-28911918 Medicago truncatula
Medtr1g067150 1.0kb downstream 1.0kb downstream 16125 true chr1: 28894794-28910918 Medicago truncatula
Medtr1g067150 1.0kb downstream 1.0kb downstream 1000 false chr1: 28894794-28895793 Medicago truncatula
Medtr1g067150 2.0kb upstream 2.0kb upstream 17125 true chr1: 28895794-28912918 Medicago truncatula
Medtr1g067150 2.0kb upstream 2.0kb upstream 2000 false chr1: 28910919-28912918 Medicago truncatula
Medtr1g067150 2.0kb downstream 2.0kb downstream 17125 true chr1: 28893794-28910918 Medicago truncatula
Medtr1g067150 2.0kb downstream 2.0kb downstream 2000 false chr1: 28893794-28895793 Medicago truncatula
Medtr1g067150 5.0kb upstream 5.0kb upstream 20125 true chr1: 28895794-28915918 Medicago truncatula
Medtr1g067150 5.0kb upstream 5.0kb upstream 5000 false chr1: 28910919-28915918 Medicago truncatula
Medtr1g067150 5.0kb downstream 5.0kb downstream 20125 true chr1: 28890794-28910918 Medicago truncatula
Medtr1g067150 5.0kb downstream 5.0kb downstream 5000 false chr1: 28890794-28895793 Medicago truncatula
Medtr1g067150 10.0kb upstream 10.0kb upstream 25125 true chr1: 28895794-28920918 Medicago truncatula
Medtr1g067150 10.0kb upstream 10.0kb upstream 10000 false chr1: 28910919-28920918 Medicago truncatula
Medtr1g067150 10.0kb downstream 10.0kb downstream 25125 true chr1: 28885794-28910918 Medicago truncatula
Medtr1g067150 10.0kb downstream 10.0kb downstream 10000 false chr1: 28885794-28895793 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310200 5265 Fabidae View MSA
124069487 5270 Rosid View MSA
123745324 5271 Pentapetalae View MSA
122795755 5272 Eudicot View MSA
122044400 5273 Angiosperm View MSA
121345248 5274 Embryophyte View MSA
123428184 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.092       High
cufflinks 0.022     Low  
cufflinks 0.019     Low  
cufflinks 0.009     Low  
cufflinks 0.028     Low  
cufflinks 0.004     Low Low
cufflinks 0.021     Low  
cufflinks 0.017     Low  
cufflinks 0.007     Low  

0 Strain