Gene : Medtr1g083620 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR18896:SF64 - PHOSPHOLIPASE D P2 Description:  phospholipase D p2-like protein
Genomic Order:  4568 Name:  ? Medtr1g083620
Secondary Identifier:  ? PAC:31097324
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPASYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3561 Medicago truncatula pathologic  
Mtruncatula PWY-7039 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083620 0.5kb upstream 0.5kb upstream 11130 true chr1: 37201987-37213116 Medicago truncatula
Medtr1g083620 0.5kb upstream 0.5kb upstream 500 false chr1: 37201987-37202486 Medicago truncatula
Medtr1g083620 0.5kb downstream 0.5kb downstream 11130 true chr1: 37202487-37213616 Medicago truncatula
Medtr1g083620 0.5kb downstream 0.5kb downstream 500 false chr1: 37213117-37213616 Medicago truncatula
Medtr1g083620 1.0kb upstream 1.0kb upstream 11630 true chr1: 37201487-37213116 Medicago truncatula
Medtr1g083620 1.0kb upstream 1.0kb upstream 1000 false chr1: 37201487-37202486 Medicago truncatula
Medtr1g083620 1.0kb downstream 1.0kb downstream 11630 true chr1: 37202487-37214116 Medicago truncatula
Medtr1g083620 1.0kb downstream 1.0kb downstream 1000 false chr1: 37213117-37214116 Medicago truncatula
Medtr1g083620 2.0kb upstream 2.0kb upstream 12630 true chr1: 37200487-37213116 Medicago truncatula
Medtr1g083620 2.0kb upstream 2.0kb upstream 2000 false chr1: 37200487-37202486 Medicago truncatula
Medtr1g083620 2.0kb downstream 2.0kb downstream 12630 true chr1: 37202487-37215116 Medicago truncatula
Medtr1g083620 2.0kb downstream 2.0kb downstream 2000 false chr1: 37213117-37215116 Medicago truncatula
Medtr1g083620 5.0kb upstream 5.0kb upstream 15630 true chr1: 37197487-37213116 Medicago truncatula
Medtr1g083620 5.0kb upstream 5.0kb upstream 5000 false chr1: 37197487-37202486 Medicago truncatula
Medtr1g083620 5.0kb downstream 5.0kb downstream 15630 true chr1: 37202487-37218116 Medicago truncatula
Medtr1g083620 5.0kb downstream 5.0kb downstream 5000 false chr1: 37213117-37218116 Medicago truncatula
Medtr1g083620 10.0kb upstream 10.0kb upstream 20630 true chr1: 37192487-37213116 Medicago truncatula
Medtr1g083620 10.0kb upstream 10.0kb upstream 10000 false chr1: 37192487-37202486 Medicago truncatula
Medtr1g083620 10.0kb downstream 10.0kb downstream 20630 true chr1: 37202487-37223116 Medicago truncatula
Medtr1g083620 10.0kb downstream 10.0kb downstream 10000 false chr1: 37213117-37223116 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308908 5265 Fabidae View MSA
124061859 5270 Rosid View MSA
123744231 5271 Pentapetalae View MSA
122791930 5272 Eudicot View MSA
122042755 5273 Angiosperm View MSA
121345352 5274 Embryophyte View MSA
123380200 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.195       High
cufflinks 0.06     Low  
cufflinks 0.047     Low  
cufflinks 0.033     Low Low
cufflinks 0.095        
cufflinks 0.101     Low  
cufflinks 0.051     Low  
cufflinks 0.049     Low  
cufflinks 0.095     Low  

0 Strain