Gene : Medtr1g083130 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24031//PTHR24031:SF260 - RNA HELICASE Description:  DEAD-box ATP-dependent RNA helicase
Genomic Order:  4530 Name:  ? Medtr1g083130
Secondary Identifier:  ? PAC:31092763
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083130 0.5kb upstream 0.5kb upstream 8312 true chr1: 37003111-37011422 Medicago truncatula
Medtr1g083130 0.5kb upstream 0.5kb upstream 500 false chr1: 37010923-37011422 Medicago truncatula
Medtr1g083130 0.5kb downstream 0.5kb downstream 8312 true chr1: 37002611-37010922 Medicago truncatula
Medtr1g083130 0.5kb downstream 0.5kb downstream 500 false chr1: 37002611-37003110 Medicago truncatula
Medtr1g083130 1.0kb upstream 1.0kb upstream 8812 true chr1: 37003111-37011922 Medicago truncatula
Medtr1g083130 1.0kb upstream 1.0kb upstream 1000 false chr1: 37010923-37011922 Medicago truncatula
Medtr1g083130 1.0kb downstream 1.0kb downstream 8812 true chr1: 37002111-37010922 Medicago truncatula
Medtr1g083130 1.0kb downstream 1.0kb downstream 1000 false chr1: 37002111-37003110 Medicago truncatula
Medtr1g083130 2.0kb upstream 2.0kb upstream 9812 true chr1: 37003111-37012922 Medicago truncatula
Medtr1g083130 2.0kb upstream 2.0kb upstream 2000 false chr1: 37010923-37012922 Medicago truncatula
Medtr1g083130 2.0kb downstream 2.0kb downstream 9812 true chr1: 37001111-37010922 Medicago truncatula
Medtr1g083130 2.0kb downstream 2.0kb downstream 2000 false chr1: 37001111-37003110 Medicago truncatula
Medtr1g083130 5.0kb upstream 5.0kb upstream 12812 true chr1: 37003111-37015922 Medicago truncatula
Medtr1g083130 5.0kb upstream 5.0kb upstream 5000 false chr1: 37010923-37015922 Medicago truncatula
Medtr1g083130 5.0kb downstream 5.0kb downstream 12812 true chr1: 36998111-37010922 Medicago truncatula
Medtr1g083130 5.0kb downstream 5.0kb downstream 5000 false chr1: 36998111-37003110 Medicago truncatula
Medtr1g083130 10.0kb upstream 10.0kb upstream 17812 true chr1: 37003111-37020922 Medicago truncatula
Medtr1g083130 10.0kb upstream 10.0kb upstream 10000 false chr1: 37010923-37020922 Medicago truncatula
Medtr1g083130 10.0kb downstream 10.0kb downstream 17812 true chr1: 36993111-37010922 Medicago truncatula
Medtr1g083130 10.0kb downstream 10.0kb downstream 10000 false chr1: 36993111-37003110 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041039 5273 Angiosperm View MSA
122304520 5265 Fabidae View MSA
124050268 5270 Rosid View MSA
123750448 5271 Pentapetalae View MSA
122793335 5272 Eudicot View MSA
121343805 5274 Embryophyte View MSA
123424907 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.923        
cufflinks 1.264        
cufflinks 1.349        
cufflinks 0.775        
cufflinks 2.012       High
cufflinks 0.525       Low
cufflinks 0.934        
cufflinks 1.25        
cufflinks 0.836        

0 Strain