Gene : Cucsa.382040 C. sativus v1.0
Defline:  (1 of 74) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  31
Name:  ? Cucsa.382040 Secondary Identifier:  ? PAC:16982276
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.382040 0.5kb upstream 0.5kb upstream 797 true scaffold03866: 165344-166140 Cucumis sativus
Cucsa.382040 0.5kb upstream 0.5kb upstream 500 false scaffold03866: 165344-165843 Cucumis sativus
Cucsa.382040 0.5kb downstream 0.5kb downstream 797 true scaffold03866: 165844-166640 Cucumis sativus
Cucsa.382040 0.5kb downstream 0.5kb downstream 500 false scaffold03866: 166141-166640 Cucumis sativus
Cucsa.382040 1.0kb upstream 1.0kb upstream 1297 true scaffold03866: 164844-166140 Cucumis sativus
Cucsa.382040 1.0kb upstream 1.0kb upstream 1000 false scaffold03866: 164844-165843 Cucumis sativus
Cucsa.382040 1.0kb downstream 1.0kb downstream 1297 true scaffold03866: 165844-167140 Cucumis sativus
Cucsa.382040 1.0kb downstream 1.0kb downstream 1000 false scaffold03866: 166141-167140 Cucumis sativus
Cucsa.382040 2.0kb upstream 2.0kb upstream 2297 true scaffold03866: 163844-166140 Cucumis sativus
Cucsa.382040 2.0kb upstream 2.0kb upstream 2000 false scaffold03866: 163844-165843 Cucumis sativus
Cucsa.382040 2.0kb downstream 2.0kb downstream 2297 true scaffold03866: 165844-168140 Cucumis sativus
Cucsa.382040 2.0kb downstream 2.0kb downstream 2000 false scaffold03866: 166141-168140 Cucumis sativus
Cucsa.382040 5.0kb upstream 5.0kb upstream 5297 true scaffold03866: 160844-166140 Cucumis sativus
Cucsa.382040 5.0kb upstream 5.0kb upstream 5000 false scaffold03866: 160844-165843 Cucumis sativus
Cucsa.382040 5.0kb downstream 5.0kb downstream 5297 true scaffold03866: 165844-171140 Cucumis sativus
Cucsa.382040 5.0kb downstream 5.0kb downstream 5000 false scaffold03866: 166141-171140 Cucumis sativus
Cucsa.382040 10.0kb upstream 10.0kb upstream 10297 true scaffold03866: 155844-166140 Cucumis sativus
Cucsa.382040 10.0kb upstream 10.0kb upstream 10000 false scaffold03866: 155844-165843 Cucumis sativus
Cucsa.382040 10.0kb downstream 10.0kb downstream 10297 true scaffold03866: 165844-176140 Cucumis sativus
Cucsa.382040 10.0kb downstream 10.0kb downstream 10000 false scaffold03866: 166141-176140 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain