Gene : Cucsa.381980 C. sativus v1.0
Defline:  (1 of 74) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  25
Name:  ? Cucsa.381980 Secondary Identifier:  ? PAC:16982270
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.381980 0.5kb upstream 0.5kb upstream 1193 true scaffold03866: 141443-142635 Cucumis sativus
Cucsa.381980 0.5kb upstream 0.5kb upstream 500 false scaffold03866: 142136-142635 Cucumis sativus
Cucsa.381980 0.5kb downstream 0.5kb downstream 1193 true scaffold03866: 140943-142135 Cucumis sativus
Cucsa.381980 0.5kb downstream 0.5kb downstream 500 false scaffold03866: 140943-141442 Cucumis sativus
Cucsa.381980 1.0kb upstream 1.0kb upstream 1693 true scaffold03866: 141443-143135 Cucumis sativus
Cucsa.381980 1.0kb upstream 1.0kb upstream 1000 false scaffold03866: 142136-143135 Cucumis sativus
Cucsa.381980 1.0kb downstream 1.0kb downstream 1693 true scaffold03866: 140443-142135 Cucumis sativus
Cucsa.381980 1.0kb downstream 1.0kb downstream 1000 false scaffold03866: 140443-141442 Cucumis sativus
Cucsa.381980 2.0kb upstream 2.0kb upstream 2693 true scaffold03866: 141443-144135 Cucumis sativus
Cucsa.381980 2.0kb upstream 2.0kb upstream 2000 false scaffold03866: 142136-144135 Cucumis sativus
Cucsa.381980 2.0kb downstream 2.0kb downstream 2693 true scaffold03866: 139443-142135 Cucumis sativus
Cucsa.381980 2.0kb downstream 2.0kb downstream 2000 false scaffold03866: 139443-141442 Cucumis sativus
Cucsa.381980 5.0kb upstream 5.0kb upstream 5693 true scaffold03866: 141443-147135 Cucumis sativus
Cucsa.381980 5.0kb upstream 5.0kb upstream 5000 false scaffold03866: 142136-147135 Cucumis sativus
Cucsa.381980 5.0kb downstream 5.0kb downstream 5693 true scaffold03866: 136443-142135 Cucumis sativus
Cucsa.381980 5.0kb downstream 5.0kb downstream 5000 false scaffold03866: 136443-141442 Cucumis sativus
Cucsa.381980 10.0kb upstream 10.0kb upstream 10693 true scaffold03866: 141443-152135 Cucumis sativus
Cucsa.381980 10.0kb upstream 10.0kb upstream 10000 false scaffold03866: 142136-152135 Cucumis sativus
Cucsa.381980 10.0kb downstream 10.0kb downstream 10693 true scaffold03866: 131443-142135 Cucumis sativus
Cucsa.381980 10.0kb downstream 10.0kb downstream 10000 false scaffold03866: 131443-141442 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237755 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain