Gene : Cucsa.309270 C. sativus v1.0
Defline:  (1 of 10) PTHR13301:SF53 - CELLULOSE SYNTHASE-LIKE PROTEIN B1-RELATED Genomic Order:  1
Name:  ? Cucsa.309270 Secondary Identifier:  ? PAC:16976448
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1001 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.309270 0.5kb upstream 0.5kb upstream 13338 true scaffold02980: 8147-21484 Cucumis sativus
Cucsa.309270 0.5kb upstream 0.5kb upstream 500 false scaffold02980: 8147-8646 Cucumis sativus
Cucsa.309270 0.5kb downstream 0.5kb downstream 13338 true scaffold02980: 8647-21984 Cucumis sativus
Cucsa.309270 0.5kb downstream 0.5kb downstream 500 false scaffold02980: 21485-21984 Cucumis sativus
Cucsa.309270 1.0kb upstream 1.0kb upstream 13838 true scaffold02980: 7647-21484 Cucumis sativus
Cucsa.309270 1.0kb upstream 1.0kb upstream 1000 false scaffold02980: 7647-8646 Cucumis sativus
Cucsa.309270 1.0kb downstream 1.0kb downstream 13838 true scaffold02980: 8647-22484 Cucumis sativus
Cucsa.309270 1.0kb downstream 1.0kb downstream 1000 false scaffold02980: 21485-22484 Cucumis sativus
Cucsa.309270 2.0kb upstream 2.0kb upstream 14838 true scaffold02980: 6647-21484 Cucumis sativus
Cucsa.309270 2.0kb upstream 2.0kb upstream 2000 false scaffold02980: 6647-8646 Cucumis sativus
Cucsa.309270 2.0kb downstream 2.0kb downstream 14838 true scaffold02980: 8647-23484 Cucumis sativus
Cucsa.309270 2.0kb downstream 2.0kb downstream 2000 false scaffold02980: 21485-23484 Cucumis sativus
Cucsa.309270 5.0kb upstream 5.0kb upstream 17838 true scaffold02980: 3647-21484 Cucumis sativus
Cucsa.309270 5.0kb upstream 5.0kb upstream 5000 false scaffold02980: 3647-8646 Cucumis sativus
Cucsa.309270 5.0kb downstream 5.0kb downstream 17838 true scaffold02980: 8647-26484 Cucumis sativus
Cucsa.309270 5.0kb downstream 5.0kb downstream 5000 false scaffold02980: 21485-26484 Cucumis sativus
Cucsa.309270 10.0kb upstream 10.0kb upstream 21484 true scaffold02980: 1-21484 Cucumis sativus
Cucsa.309270 10.0kb upstream 10.0kb upstream 8646 false scaffold02980: 1-8646 Cucumis sativus
Cucsa.309270 10.0kb downstream 10.0kb downstream 22838 true scaffold02980: 8647-31484 Cucumis sativus
Cucsa.309270 10.0kb downstream 10.0kb downstream 10000 false scaffold02980: 21485-31484 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309666 5265 Fabidae View MSA
124062665 5270 Rosid View MSA
123753596 5271 Pentapetalae View MSA
122796803 5272 Eudicot View MSA
122049862 5273 Angiosperm View MSA
121311621 5274 Embryophyte View MSA
123348894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain