Gene : Cucsa.301700 C. sativus v1.0
Defline:  (1 of 3) PTHR11847 - RIBOSOMAL PROTEIN L15 Genomic Order:  1
Name:  ? Cucsa.301700 Secondary Identifier:  ? PAC:16975644
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.301700 0.5kb upstream 0.5kb upstream 2635 true scaffold02951: 8983-11617 Cucumis sativus
Cucsa.301700 0.5kb upstream 0.5kb upstream 500 false scaffold02951: 8983-9482 Cucumis sativus
Cucsa.301700 0.5kb downstream 0.5kb downstream 2635 true scaffold02951: 9483-12117 Cucumis sativus
Cucsa.301700 0.5kb downstream 0.5kb downstream 500 false scaffold02951: 11618-12117 Cucumis sativus
Cucsa.301700 1.0kb upstream 1.0kb upstream 3135 true scaffold02951: 8483-11617 Cucumis sativus
Cucsa.301700 1.0kb upstream 1.0kb upstream 1000 false scaffold02951: 8483-9482 Cucumis sativus
Cucsa.301700 1.0kb downstream 1.0kb downstream 3135 true scaffold02951: 9483-12617 Cucumis sativus
Cucsa.301700 1.0kb downstream 1.0kb downstream 1000 false scaffold02951: 11618-12617 Cucumis sativus
Cucsa.301700 2.0kb upstream 2.0kb upstream 4135 true scaffold02951: 7483-11617 Cucumis sativus
Cucsa.301700 2.0kb upstream 2.0kb upstream 2000 false scaffold02951: 7483-9482 Cucumis sativus
Cucsa.301700 2.0kb downstream 2.0kb downstream 4135 true scaffold02951: 9483-13617 Cucumis sativus
Cucsa.301700 2.0kb downstream 2.0kb downstream 2000 false scaffold02951: 11618-13617 Cucumis sativus
Cucsa.301700 5.0kb upstream 5.0kb upstream 7135 true scaffold02951: 4483-11617 Cucumis sativus
Cucsa.301700 5.0kb upstream 5.0kb upstream 5000 false scaffold02951: 4483-9482 Cucumis sativus
Cucsa.301700 5.0kb downstream 5.0kb downstream 7135 true scaffold02951: 9483-16617 Cucumis sativus
Cucsa.301700 5.0kb downstream 5.0kb downstream 5000 false scaffold02951: 11618-16617 Cucumis sativus
Cucsa.301700 10.0kb upstream 10.0kb upstream 11617 true scaffold02951: 1-11617 Cucumis sativus
Cucsa.301700 10.0kb upstream 10.0kb upstream 9482 false scaffold02951: 1-9482 Cucumis sativus
Cucsa.301700 10.0kb downstream 10.0kb downstream 12135 true scaffold02951: 9483-21617 Cucumis sativus
Cucsa.301700 10.0kb downstream 10.0kb downstream 10000 false scaffold02951: 11618-21617 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605137 5273 Angiosperm Singleton cluster - no MSA
122235400 5265 Fabidae Singleton cluster - no MSA
123981616 5270 Rosid Singleton cluster - no MSA
123557291 5271 Pentapetalae Singleton cluster - no MSA
122592105 5272 Eudicot Singleton cluster - no MSA
120877427 5274 Embryophyte Singleton cluster - no MSA
122918316 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain