Gene : Cucsa.263180 C. sativus v1.0
Defline:  (1 of 40) PF02309 - AUX/IAA family (AUX_IAA) Genomic Order:  1
Name:  ? Cucsa.263180 Secondary Identifier:  ? PAC:16973224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.263180 0.5kb upstream 0.5kb upstream 4008 true scaffold02308: 7681-11688 Cucumis sativus
Cucsa.263180 0.5kb upstream 0.5kb upstream 500 false scaffold02308: 7681-8180 Cucumis sativus
Cucsa.263180 0.5kb downstream 0.5kb downstream 4008 true scaffold02308: 8181-12188 Cucumis sativus
Cucsa.263180 0.5kb downstream 0.5kb downstream 500 false scaffold02308: 11689-12188 Cucumis sativus
Cucsa.263180 1.0kb upstream 1.0kb upstream 4508 true scaffold02308: 7181-11688 Cucumis sativus
Cucsa.263180 1.0kb upstream 1.0kb upstream 1000 false scaffold02308: 7181-8180 Cucumis sativus
Cucsa.263180 1.0kb downstream 1.0kb downstream 4508 true scaffold02308: 8181-12688 Cucumis sativus
Cucsa.263180 1.0kb downstream 1.0kb downstream 1000 false scaffold02308: 11689-12688 Cucumis sativus
Cucsa.263180 2.0kb upstream 2.0kb upstream 5508 true scaffold02308: 6181-11688 Cucumis sativus
Cucsa.263180 2.0kb upstream 2.0kb upstream 2000 false scaffold02308: 6181-8180 Cucumis sativus
Cucsa.263180 2.0kb downstream 2.0kb downstream 5508 true scaffold02308: 8181-13688 Cucumis sativus
Cucsa.263180 2.0kb downstream 2.0kb downstream 2000 false scaffold02308: 11689-13688 Cucumis sativus
Cucsa.263180 5.0kb upstream 5.0kb upstream 8508 true scaffold02308: 3181-11688 Cucumis sativus
Cucsa.263180 5.0kb upstream 5.0kb upstream 5000 false scaffold02308: 3181-8180 Cucumis sativus
Cucsa.263180 5.0kb downstream 5.0kb downstream 8508 true scaffold02308: 8181-16688 Cucumis sativus
Cucsa.263180 5.0kb downstream 5.0kb downstream 5000 false scaffold02308: 11689-16688 Cucumis sativus
Cucsa.263180 10.0kb upstream 10.0kb upstream 11688 true scaffold02308: 1-11688 Cucumis sativus
Cucsa.263180 10.0kb upstream 10.0kb upstream 8180 false scaffold02308: 1-8180 Cucumis sativus
Cucsa.263180 10.0kb downstream 10.0kb downstream 13508 true scaffold02308: 8181-21688 Cucumis sativus
Cucsa.263180 10.0kb downstream 10.0kb downstream 10000 false scaffold02308: 11689-21688 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308541 5265 Fabidae View MSA
124070814 5270 Rosid View MSA
123750768 5271 Pentapetalae View MSA
122791591 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain