Gene : Cucsa.234080 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  6
Name:  ? Cucsa.234080 Secondary Identifier:  ? PAC:16970337
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.234080 0.5kb upstream 0.5kb upstream 8397 true scaffold01999: 40019-48415 Cucumis sativus
Cucsa.234080 0.5kb upstream 0.5kb upstream 500 false scaffold01999: 40019-40518 Cucumis sativus
Cucsa.234080 0.5kb downstream 0.5kb downstream 8397 true scaffold01999: 40519-48915 Cucumis sativus
Cucsa.234080 0.5kb downstream 0.5kb downstream 500 false scaffold01999: 48416-48915 Cucumis sativus
Cucsa.234080 1.0kb upstream 1.0kb upstream 8897 true scaffold01999: 39519-48415 Cucumis sativus
Cucsa.234080 1.0kb upstream 1.0kb upstream 1000 false scaffold01999: 39519-40518 Cucumis sativus
Cucsa.234080 1.0kb downstream 1.0kb downstream 8897 true scaffold01999: 40519-49415 Cucumis sativus
Cucsa.234080 1.0kb downstream 1.0kb downstream 1000 false scaffold01999: 48416-49415 Cucumis sativus
Cucsa.234080 2.0kb upstream 2.0kb upstream 9897 true scaffold01999: 38519-48415 Cucumis sativus
Cucsa.234080 2.0kb upstream 2.0kb upstream 2000 false scaffold01999: 38519-40518 Cucumis sativus
Cucsa.234080 2.0kb downstream 2.0kb downstream 9897 true scaffold01999: 40519-50415 Cucumis sativus
Cucsa.234080 2.0kb downstream 2.0kb downstream 2000 false scaffold01999: 48416-50415 Cucumis sativus
Cucsa.234080 5.0kb upstream 5.0kb upstream 12897 true scaffold01999: 35519-48415 Cucumis sativus
Cucsa.234080 5.0kb upstream 5.0kb upstream 5000 false scaffold01999: 35519-40518 Cucumis sativus
Cucsa.234080 5.0kb downstream 5.0kb downstream 12897 true scaffold01999: 40519-53415 Cucumis sativus
Cucsa.234080 5.0kb downstream 5.0kb downstream 5000 false scaffold01999: 48416-53415 Cucumis sativus
Cucsa.234080 10.0kb upstream 10.0kb upstream 17897 true scaffold01999: 30519-48415 Cucumis sativus
Cucsa.234080 10.0kb upstream 10.0kb upstream 10000 false scaffold01999: 30519-40518 Cucumis sativus
Cucsa.234080 10.0kb downstream 10.0kb downstream 17897 true scaffold01999: 40519-58415 Cucumis sativus
Cucsa.234080 10.0kb downstream 10.0kb downstream 10000 false scaffold01999: 48416-58415 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308481 5265 Fabidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain