Gene : Cucsa.232060 C. sativus v1.0
Defline:  (1 of 2) PTHR31321:SF10 - PECTINESTERASE 11-RELATED Genomic Order:  28
Name:  ? Cucsa.232060 Secondary Identifier:  ? PAC:16970182
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.232060 0.5kb upstream 0.5kb upstream 2416 true scaffold01989: 181067-183482 Cucumis sativus
Cucsa.232060 0.5kb upstream 0.5kb upstream 500 false scaffold01989: 181067-181566 Cucumis sativus
Cucsa.232060 0.5kb downstream 0.5kb downstream 2416 true scaffold01989: 181567-183982 Cucumis sativus
Cucsa.232060 0.5kb downstream 0.5kb downstream 500 false scaffold01989: 183483-183982 Cucumis sativus
Cucsa.232060 1.0kb upstream 1.0kb upstream 2916 true scaffold01989: 180567-183482 Cucumis sativus
Cucsa.232060 1.0kb upstream 1.0kb upstream 1000 false scaffold01989: 180567-181566 Cucumis sativus
Cucsa.232060 1.0kb downstream 1.0kb downstream 2916 true scaffold01989: 181567-184482 Cucumis sativus
Cucsa.232060 1.0kb downstream 1.0kb downstream 1000 false scaffold01989: 183483-184482 Cucumis sativus
Cucsa.232060 2.0kb upstream 2.0kb upstream 3916 true scaffold01989: 179567-183482 Cucumis sativus
Cucsa.232060 2.0kb upstream 2.0kb upstream 2000 false scaffold01989: 179567-181566 Cucumis sativus
Cucsa.232060 2.0kb downstream 2.0kb downstream 3916 true scaffold01989: 181567-185482 Cucumis sativus
Cucsa.232060 2.0kb downstream 2.0kb downstream 2000 false scaffold01989: 183483-185482 Cucumis sativus
Cucsa.232060 5.0kb upstream 5.0kb upstream 6916 true scaffold01989: 176567-183482 Cucumis sativus
Cucsa.232060 5.0kb upstream 5.0kb upstream 5000 false scaffold01989: 176567-181566 Cucumis sativus
Cucsa.232060 5.0kb downstream 5.0kb downstream 6916 true scaffold01989: 181567-188482 Cucumis sativus
Cucsa.232060 5.0kb downstream 5.0kb downstream 5000 false scaffold01989: 183483-188482 Cucumis sativus
Cucsa.232060 10.0kb upstream 10.0kb upstream 11916 true scaffold01989: 171567-183482 Cucumis sativus
Cucsa.232060 10.0kb upstream 10.0kb upstream 10000 false scaffold01989: 171567-181566 Cucumis sativus
Cucsa.232060 10.0kb downstream 10.0kb downstream 11916 true scaffold01989: 181567-193482 Cucumis sativus
Cucsa.232060 10.0kb downstream 10.0kb downstream 10000 false scaffold01989: 183483-193482 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315814 5265 Fabidae View MSA
124072507 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain