Gene : Cucsa.212260 C. sativus v1.0
Defline:  (1 of 5) PTHR21649:SF26 - CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  7
Name:  ? Cucsa.212260 Secondary Identifier:  ? PAC:16969316
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.212260 0.5kb upstream 0.5kb upstream 8450 true scaffold01543: 59563-68012 Cucumis sativus
Cucsa.212260 0.5kb upstream 0.5kb upstream 500 false scaffold01543: 59563-60062 Cucumis sativus
Cucsa.212260 0.5kb downstream 0.5kb downstream 8450 true scaffold01543: 60063-68512 Cucumis sativus
Cucsa.212260 0.5kb downstream 0.5kb downstream 500 false scaffold01543: 68013-68512 Cucumis sativus
Cucsa.212260 1.0kb upstream 1.0kb upstream 8950 true scaffold01543: 59063-68012 Cucumis sativus
Cucsa.212260 1.0kb upstream 1.0kb upstream 1000 false scaffold01543: 59063-60062 Cucumis sativus
Cucsa.212260 1.0kb downstream 1.0kb downstream 8950 true scaffold01543: 60063-69012 Cucumis sativus
Cucsa.212260 1.0kb downstream 1.0kb downstream 1000 false scaffold01543: 68013-69012 Cucumis sativus
Cucsa.212260 2.0kb upstream 2.0kb upstream 9950 true scaffold01543: 58063-68012 Cucumis sativus
Cucsa.212260 2.0kb upstream 2.0kb upstream 2000 false scaffold01543: 58063-60062 Cucumis sativus
Cucsa.212260 2.0kb downstream 2.0kb downstream 9950 true scaffold01543: 60063-70012 Cucumis sativus
Cucsa.212260 2.0kb downstream 2.0kb downstream 2000 false scaffold01543: 68013-70012 Cucumis sativus
Cucsa.212260 5.0kb upstream 5.0kb upstream 12950 true scaffold01543: 55063-68012 Cucumis sativus
Cucsa.212260 5.0kb upstream 5.0kb upstream 5000 false scaffold01543: 55063-60062 Cucumis sativus
Cucsa.212260 5.0kb downstream 5.0kb downstream 12950 true scaffold01543: 60063-73012 Cucumis sativus
Cucsa.212260 5.0kb downstream 5.0kb downstream 5000 false scaffold01543: 68013-73012 Cucumis sativus
Cucsa.212260 10.0kb upstream 10.0kb upstream 17950 true scaffold01543: 50063-68012 Cucumis sativus
Cucsa.212260 10.0kb upstream 10.0kb upstream 10000 false scaffold01543: 50063-60062 Cucumis sativus
Cucsa.212260 10.0kb downstream 10.0kb downstream 17950 true scaffold01543: 60063-78012 Cucumis sativus
Cucsa.212260 10.0kb downstream 10.0kb downstream 10000 false scaffold01543: 68013-78012 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314115 5265 Fabidae View MSA
124072480 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain