Gene : Cucsa.172170 C. sativus v1.0
Defline:  (1 of 11) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  11
Name:  ? Cucsa.172170 Secondary Identifier:  ? PAC:16966552
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.172170 0.5kb upstream 0.5kb upstream 2164 true scaffold01196: 86464-88627 Cucumis sativus
Cucsa.172170 0.5kb upstream 0.5kb upstream 500 false scaffold01196: 88128-88627 Cucumis sativus
Cucsa.172170 0.5kb downstream 0.5kb downstream 2164 true scaffold01196: 85964-88127 Cucumis sativus
Cucsa.172170 0.5kb downstream 0.5kb downstream 500 false scaffold01196: 85964-86463 Cucumis sativus
Cucsa.172170 1.0kb upstream 1.0kb upstream 2664 true scaffold01196: 86464-89127 Cucumis sativus
Cucsa.172170 1.0kb upstream 1.0kb upstream 1000 false scaffold01196: 88128-89127 Cucumis sativus
Cucsa.172170 1.0kb downstream 1.0kb downstream 2664 true scaffold01196: 85464-88127 Cucumis sativus
Cucsa.172170 1.0kb downstream 1.0kb downstream 1000 false scaffold01196: 85464-86463 Cucumis sativus
Cucsa.172170 2.0kb upstream 2.0kb upstream 3664 true scaffold01196: 86464-90127 Cucumis sativus
Cucsa.172170 2.0kb upstream 2.0kb upstream 2000 false scaffold01196: 88128-90127 Cucumis sativus
Cucsa.172170 2.0kb downstream 2.0kb downstream 3664 true scaffold01196: 84464-88127 Cucumis sativus
Cucsa.172170 2.0kb downstream 2.0kb downstream 2000 false scaffold01196: 84464-86463 Cucumis sativus
Cucsa.172170 5.0kb upstream 5.0kb upstream 6664 true scaffold01196: 86464-93127 Cucumis sativus
Cucsa.172170 5.0kb upstream 5.0kb upstream 5000 false scaffold01196: 88128-93127 Cucumis sativus
Cucsa.172170 5.0kb downstream 5.0kb downstream 6664 true scaffold01196: 81464-88127 Cucumis sativus
Cucsa.172170 5.0kb downstream 5.0kb downstream 5000 false scaffold01196: 81464-86463 Cucumis sativus
Cucsa.172170 10.0kb upstream 10.0kb upstream 11664 true scaffold01196: 86464-98127 Cucumis sativus
Cucsa.172170 10.0kb upstream 10.0kb upstream 10000 false scaffold01196: 88128-98127 Cucumis sativus
Cucsa.172170 10.0kb downstream 10.0kb downstream 11664 true scaffold01196: 76464-88127 Cucumis sativus
Cucsa.172170 10.0kb downstream 10.0kb downstream 10000 false scaffold01196: 76464-86463 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303163 5265 Fabidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain