Gene : Cucsa.162960 C. sativus v1.0
Defline:  (1 of 39) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  328
Name:  ? Cucsa.162960 Secondary Identifier:  ? PAC:16965763
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.162960 0.5kb upstream 0.5kb upstream 2358 true scaffold01144: 2431690-2434047 Cucumis sativus
Cucsa.162960 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 2431690-2432189 Cucumis sativus
Cucsa.162960 0.5kb downstream 0.5kb downstream 2358 true scaffold01144: 2432190-2434547 Cucumis sativus
Cucsa.162960 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 2434048-2434547 Cucumis sativus
Cucsa.162960 1.0kb upstream 1.0kb upstream 2858 true scaffold01144: 2431190-2434047 Cucumis sativus
Cucsa.162960 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 2431190-2432189 Cucumis sativus
Cucsa.162960 1.0kb downstream 1.0kb downstream 2858 true scaffold01144: 2432190-2435047 Cucumis sativus
Cucsa.162960 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 2434048-2435047 Cucumis sativus
Cucsa.162960 2.0kb upstream 2.0kb upstream 3858 true scaffold01144: 2430190-2434047 Cucumis sativus
Cucsa.162960 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 2430190-2432189 Cucumis sativus
Cucsa.162960 2.0kb downstream 2.0kb downstream 3858 true scaffold01144: 2432190-2436047 Cucumis sativus
Cucsa.162960 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 2434048-2436047 Cucumis sativus
Cucsa.162960 5.0kb upstream 5.0kb upstream 6858 true scaffold01144: 2427190-2434047 Cucumis sativus
Cucsa.162960 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 2427190-2432189 Cucumis sativus
Cucsa.162960 5.0kb downstream 5.0kb downstream 6858 true scaffold01144: 2432190-2439047 Cucumis sativus
Cucsa.162960 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 2434048-2439047 Cucumis sativus
Cucsa.162960 10.0kb upstream 10.0kb upstream 11858 true scaffold01144: 2422190-2434047 Cucumis sativus
Cucsa.162960 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 2422190-2432189 Cucumis sativus
Cucsa.162960 10.0kb downstream 10.0kb downstream 11858 true scaffold01144: 2432190-2444047 Cucumis sativus
Cucsa.162960 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 2434048-2444047 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026168 5273 Angiosperm View MSA
122307514 5265 Fabidae View MSA
124060726 5270 Rosid View MSA
123739079 5271 Pentapetalae View MSA
122791557 5272 Eudicot View MSA
121296211 5274 Embryophyte View MSA
123334413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain