Gene : Cucsa.157230 C. sativus v1.0
Defline:  (1 of 3) PTHR31251:SF20 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A-RELATED Genomic Order:  39
Name:  ? Cucsa.157230 Secondary Identifier:  ? PAC:16964965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.157230 0.5kb upstream 0.5kb upstream 2892 true scaffold01141: 240146-243037 Cucumis sativus
Cucsa.157230 0.5kb upstream 0.5kb upstream 500 false scaffold01141: 240146-240645 Cucumis sativus
Cucsa.157230 0.5kb downstream 0.5kb downstream 2892 true scaffold01141: 240646-243537 Cucumis sativus
Cucsa.157230 0.5kb downstream 0.5kb downstream 500 false scaffold01141: 243038-243537 Cucumis sativus
Cucsa.157230 1.0kb upstream 1.0kb upstream 3392 true scaffold01141: 239646-243037 Cucumis sativus
Cucsa.157230 1.0kb upstream 1.0kb upstream 1000 false scaffold01141: 239646-240645 Cucumis sativus
Cucsa.157230 1.0kb downstream 1.0kb downstream 3392 true scaffold01141: 240646-244037 Cucumis sativus
Cucsa.157230 1.0kb downstream 1.0kb downstream 1000 false scaffold01141: 243038-244037 Cucumis sativus
Cucsa.157230 2.0kb upstream 2.0kb upstream 4392 true scaffold01141: 238646-243037 Cucumis sativus
Cucsa.157230 2.0kb upstream 2.0kb upstream 2000 false scaffold01141: 238646-240645 Cucumis sativus
Cucsa.157230 2.0kb downstream 2.0kb downstream 4392 true scaffold01141: 240646-245037 Cucumis sativus
Cucsa.157230 2.0kb downstream 2.0kb downstream 2000 false scaffold01141: 243038-245037 Cucumis sativus
Cucsa.157230 5.0kb upstream 5.0kb upstream 7392 true scaffold01141: 235646-243037 Cucumis sativus
Cucsa.157230 5.0kb upstream 5.0kb upstream 5000 false scaffold01141: 235646-240645 Cucumis sativus
Cucsa.157230 5.0kb downstream 5.0kb downstream 7392 true scaffold01141: 240646-248037 Cucumis sativus
Cucsa.157230 5.0kb downstream 5.0kb downstream 5000 false scaffold01141: 243038-248037 Cucumis sativus
Cucsa.157230 10.0kb upstream 10.0kb upstream 12392 true scaffold01141: 230646-243037 Cucumis sativus
Cucsa.157230 10.0kb upstream 10.0kb upstream 10000 false scaffold01141: 230646-240645 Cucumis sativus
Cucsa.157230 10.0kb downstream 10.0kb downstream 12392 true scaffold01141: 240646-253037 Cucumis sativus
Cucsa.157230 10.0kb downstream 10.0kb downstream 10000 false scaffold01141: 243038-253037 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311176 5265 Fabidae View MSA
124071884 5270 Rosid View MSA
123752325 5271 Pentapetalae View MSA
122795767 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain