Gene : Cre09.g407550 C. reinhardtii v5.6
Defline:  (1 of 12) PF02037 - SAP domain (SAP) Genomic Order:  976
Name:  ? Cre09.g407550 Secondary Identifier:  ? PAC:30781057
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g407550 0.5kb upstream 0.5kb upstream 7032 true chromosome_9: 6510259-6517290 Chlamydomonas reinhardtii
Cre09.g407550 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 6510259-6510758 Chlamydomonas reinhardtii
Cre09.g407550 0.5kb downstream 0.5kb downstream 7032 true chromosome_9: 6510759-6517790 Chlamydomonas reinhardtii
Cre09.g407550 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 6517291-6517790 Chlamydomonas reinhardtii
Cre09.g407550 1.0kb upstream 1.0kb upstream 7532 true chromosome_9: 6509759-6517290 Chlamydomonas reinhardtii
Cre09.g407550 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 6509759-6510758 Chlamydomonas reinhardtii
Cre09.g407550 1.0kb downstream 1.0kb downstream 7532 true chromosome_9: 6510759-6518290 Chlamydomonas reinhardtii
Cre09.g407550 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 6517291-6518290 Chlamydomonas reinhardtii
Cre09.g407550 2.0kb upstream 2.0kb upstream 8532 true chromosome_9: 6508759-6517290 Chlamydomonas reinhardtii
Cre09.g407550 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 6508759-6510758 Chlamydomonas reinhardtii
Cre09.g407550 2.0kb downstream 2.0kb downstream 8532 true chromosome_9: 6510759-6519290 Chlamydomonas reinhardtii
Cre09.g407550 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 6517291-6519290 Chlamydomonas reinhardtii
Cre09.g407550 5.0kb upstream 5.0kb upstream 11532 true chromosome_9: 6505759-6517290 Chlamydomonas reinhardtii
Cre09.g407550 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 6505759-6510758 Chlamydomonas reinhardtii
Cre09.g407550 5.0kb downstream 5.0kb downstream 11532 true chromosome_9: 6510759-6522290 Chlamydomonas reinhardtii
Cre09.g407550 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 6517291-6522290 Chlamydomonas reinhardtii
Cre09.g407550 10.0kb upstream 10.0kb upstream 16532 true chromosome_9: 6500759-6517290 Chlamydomonas reinhardtii
Cre09.g407550 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 6500759-6510758 Chlamydomonas reinhardtii
Cre09.g407550 10.0kb downstream 10.0kb downstream 16532 true chromosome_9: 6510759-6527290 Chlamydomonas reinhardtii
Cre09.g407550 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 6517291-6527290 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093782 5260 Chlorophyte View MSA
123410815 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.178        
cufflinks 0.261       High
cufflinks 0.005     Low Low
cufflinks 0.042     Low  
cufflinks 0.138     Low  
cufflinks 0.076     Low  
cufflinks 0.056     Low  
cufflinks 0.045     Low  
cufflinks 0.408       High
cufflinks 0.029     Low  
cufflinks 0.009     Low Low
cufflinks 0.05     Low  
cufflinks 0.004     Low Low
cufflinks 0.089     Low  
cufflinks 0.073     Low  
cufflinks 0.279       High
cufflinks 0.25       High
cufflinks 0.057     Low  
cufflinks 0.011     Low Low
cufflinks 0.018     Low  
cufflinks 0.086     Low  
cufflinks 0.305       High
cufflinks 0.035     Low  
cufflinks 0.012     Low Low
cufflinks 0.379       High
cufflinks 0.209107 0.0 0.457513 Low High
cufflinks 0.278737 0.0 0.701685 Low  
cufflinks 0.754518 0.0 1.87671   High
cufflinks 0.149396 0.0 0.336738 Low  
cufflinks 0.52752 0.0 1.1466   High

0 Strain