Gene : Cre09.g407600 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR20858//PTHR20858:SF18 - PHOSPHOMETHYLPYRIMIDINE KINASE // PROTEIN PET18 Genomic Order:  977
Name:  ? Cre09.g407600 Secondary Identifier:  ? PAC:30781361
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g407600 0.5kb upstream 0.5kb upstream 3852 true chromosome_9: 6516839-6520690 Chlamydomonas reinhardtii
Cre09.g407600 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 6516839-6517338 Chlamydomonas reinhardtii
Cre09.g407600 0.5kb downstream 0.5kb downstream 3852 true chromosome_9: 6517339-6521190 Chlamydomonas reinhardtii
Cre09.g407600 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 6520691-6521190 Chlamydomonas reinhardtii
Cre09.g407600 1.0kb upstream 1.0kb upstream 4352 true chromosome_9: 6516339-6520690 Chlamydomonas reinhardtii
Cre09.g407600 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 6516339-6517338 Chlamydomonas reinhardtii
Cre09.g407600 1.0kb downstream 1.0kb downstream 4352 true chromosome_9: 6517339-6521690 Chlamydomonas reinhardtii
Cre09.g407600 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 6520691-6521690 Chlamydomonas reinhardtii
Cre09.g407600 2.0kb upstream 2.0kb upstream 5352 true chromosome_9: 6515339-6520690 Chlamydomonas reinhardtii
Cre09.g407600 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 6515339-6517338 Chlamydomonas reinhardtii
Cre09.g407600 2.0kb downstream 2.0kb downstream 5352 true chromosome_9: 6517339-6522690 Chlamydomonas reinhardtii
Cre09.g407600 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 6520691-6522690 Chlamydomonas reinhardtii
Cre09.g407600 5.0kb upstream 5.0kb upstream 8352 true chromosome_9: 6512339-6520690 Chlamydomonas reinhardtii
Cre09.g407600 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 6512339-6517338 Chlamydomonas reinhardtii
Cre09.g407600 5.0kb downstream 5.0kb downstream 8352 true chromosome_9: 6517339-6525690 Chlamydomonas reinhardtii
Cre09.g407600 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 6520691-6525690 Chlamydomonas reinhardtii
Cre09.g407600 10.0kb upstream 10.0kb upstream 13352 true chromosome_9: 6507339-6520690 Chlamydomonas reinhardtii
Cre09.g407600 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 6507339-6517338 Chlamydomonas reinhardtii
Cre09.g407600 10.0kb downstream 10.0kb downstream 13352 true chromosome_9: 6517339-6530690 Chlamydomonas reinhardtii
Cre09.g407600 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 6520691-6530690 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093709 5260 Chlorophyte View MSA
123425587 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.807     High  
cufflinks 17.686     High  
cufflinks 15.53     High  
cufflinks 9.569        
cufflinks 16.647     High  
cufflinks 18.256     High High
cufflinks 10.319        
cufflinks 10.024        
cufflinks 13.824     High  
cufflinks 12.056     High  
cufflinks 7.373        
cufflinks 8.816        
cufflinks 14.634     High  
cufflinks 19.822     High High
cufflinks 7.889        
cufflinks 15.616     High  
cufflinks 2.254       Low
cufflinks 13.553     High  
cufflinks 2.423       Low
cufflinks 2.716       Low
cufflinks 8.797        
cufflinks 1.76       Low
cufflinks 9.002        
cufflinks 8.339        
cufflinks 1.717       Low
cufflinks 2.54949 0.0600161 5.03896   Low
cufflinks 20.1845 5.34965 35.0193    
cufflinks 4.37021 0.0 9.86172    
cufflinks 9.27212 1.55449 16.9898    
cufflinks 44.5168 7.5357 81.4979 High High

0 Strain