Gene : FAP281 C. reinhardtii v5.6
Primary Identifier:  ? Cre18.g749797 Defline:  Flagellar Associated Coiled-Coil Protein 281
Genomic Order:  35 Name:  ? Cre18.g749797
Secondary Identifier:  ? PAC:30783820
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre18.g749797 0.5kb upstream 0.5kb upstream 13346 true scaffold_18: 219165-232510 Chlamydomonas reinhardtii
Cre18.g749797 0.5kb upstream 0.5kb upstream 500 false scaffold_18: 232011-232510 Chlamydomonas reinhardtii
Cre18.g749797 0.5kb downstream 0.5kb downstream 13346 true scaffold_18: 218665-232010 Chlamydomonas reinhardtii
Cre18.g749797 0.5kb downstream 0.5kb downstream 500 false scaffold_18: 218665-219164 Chlamydomonas reinhardtii
Cre18.g749797 1.0kb upstream 1.0kb upstream 13846 true scaffold_18: 219165-233010 Chlamydomonas reinhardtii
Cre18.g749797 1.0kb upstream 1.0kb upstream 1000 false scaffold_18: 232011-233010 Chlamydomonas reinhardtii
Cre18.g749797 1.0kb downstream 1.0kb downstream 13846 true scaffold_18: 218165-232010 Chlamydomonas reinhardtii
Cre18.g749797 1.0kb downstream 1.0kb downstream 1000 false scaffold_18: 218165-219164 Chlamydomonas reinhardtii
Cre18.g749797 2.0kb upstream 2.0kb upstream 14846 true scaffold_18: 219165-234010 Chlamydomonas reinhardtii
Cre18.g749797 2.0kb upstream 2.0kb upstream 2000 false scaffold_18: 232011-234010 Chlamydomonas reinhardtii
Cre18.g749797 2.0kb downstream 2.0kb downstream 14846 true scaffold_18: 217165-232010 Chlamydomonas reinhardtii
Cre18.g749797 2.0kb downstream 2.0kb downstream 2000 false scaffold_18: 217165-219164 Chlamydomonas reinhardtii
Cre18.g749797 5.0kb upstream 5.0kb upstream 17846 true scaffold_18: 219165-237010 Chlamydomonas reinhardtii
Cre18.g749797 5.0kb upstream 5.0kb upstream 5000 false scaffold_18: 232011-237010 Chlamydomonas reinhardtii
Cre18.g749797 5.0kb downstream 5.0kb downstream 17846 true scaffold_18: 214165-232010 Chlamydomonas reinhardtii
Cre18.g749797 5.0kb downstream 5.0kb downstream 5000 false scaffold_18: 214165-219164 Chlamydomonas reinhardtii
Cre18.g749797 10.0kb upstream 10.0kb upstream 22846 true scaffold_18: 219165-242010 Chlamydomonas reinhardtii
Cre18.g749797 10.0kb upstream 10.0kb upstream 10000 false scaffold_18: 232011-242010 Chlamydomonas reinhardtii
Cre18.g749797 10.0kb downstream 10.0kb downstream 22846 true scaffold_18: 209165-232010 Chlamydomonas reinhardtii
Cre18.g749797 10.0kb downstream 10.0kb downstream 10000 false scaffold_18: 209165-219164 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112580 5260 Chlorophyte View MSA
123423479 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.029     Low Low
cufflinks 0.158     Low  
cufflinks 0.218        
cufflinks 0.312       High
cufflinks 0.104     Low  
cufflinks 0.093     Low  
cufflinks 0.136     Low  
cufflinks 0.201     Low  
cufflinks 0.029     Low Low
cufflinks 0.055     Low  
cufflinks 0.5       High
cufflinks 0.215     Low  
cufflinks 0.097     Low  
cufflinks 0.112     Low  
cufflinks 0.294       High
cufflinks 0.03     Low Low
cufflinks 0.048     Low  
cufflinks 0.137     Low  
cufflinks 0.054     Low  
cufflinks 0.192        
cufflinks 0.285       High
cufflinks 0.035     Low Low
cufflinks 0.172     Low  
cufflinks 0.192     Low  
cufflinks 0.031     Low Low
cufflinks 0.455546 0.0 0.911169   High
cufflinks 2.10641 0.393367 3.81946    
cufflinks 1.02808 0.0 2.39231    
cufflinks 1.54841 0.21562 2.88119   High
cufflinks 4.52588 0.502358 8.54941    

0 Strain