Gene : PF16 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g394251 Defline:  (1 of 2) PTHR23314 - SPERM-ASSOCIATED ANTIGEN 6 ARMADILLO REPEAT-CONTAINING
Genomic Order:  671 Name:  ? Cre09.g394251
Secondary Identifier:  ? PAC:30781012
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g394251 0.5kb upstream 0.5kb upstream 4590 true chromosome_9: 4203711-4208300 Chlamydomonas reinhardtii
Cre09.g394251 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 4203711-4204210 Chlamydomonas reinhardtii
Cre09.g394251 0.5kb downstream 0.5kb downstream 4590 true chromosome_9: 4204211-4208800 Chlamydomonas reinhardtii
Cre09.g394251 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 4208301-4208800 Chlamydomonas reinhardtii
Cre09.g394251 1.0kb upstream 1.0kb upstream 5090 true chromosome_9: 4203211-4208300 Chlamydomonas reinhardtii
Cre09.g394251 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 4203211-4204210 Chlamydomonas reinhardtii
Cre09.g394251 1.0kb downstream 1.0kb downstream 5090 true chromosome_9: 4204211-4209300 Chlamydomonas reinhardtii
Cre09.g394251 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 4208301-4209300 Chlamydomonas reinhardtii
Cre09.g394251 2.0kb upstream 2.0kb upstream 6090 true chromosome_9: 4202211-4208300 Chlamydomonas reinhardtii
Cre09.g394251 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 4202211-4204210 Chlamydomonas reinhardtii
Cre09.g394251 2.0kb downstream 2.0kb downstream 6090 true chromosome_9: 4204211-4210300 Chlamydomonas reinhardtii
Cre09.g394251 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 4208301-4210300 Chlamydomonas reinhardtii
Cre09.g394251 5.0kb upstream 5.0kb upstream 9090 true chromosome_9: 4199211-4208300 Chlamydomonas reinhardtii
Cre09.g394251 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 4199211-4204210 Chlamydomonas reinhardtii
Cre09.g394251 5.0kb downstream 5.0kb downstream 9090 true chromosome_9: 4204211-4213300 Chlamydomonas reinhardtii
Cre09.g394251 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 4208301-4213300 Chlamydomonas reinhardtii
Cre09.g394251 10.0kb upstream 10.0kb upstream 14090 true chromosome_9: 4194211-4208300 Chlamydomonas reinhardtii
Cre09.g394251 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 4194211-4204210 Chlamydomonas reinhardtii
Cre09.g394251 10.0kb downstream 10.0kb downstream 14090 true chromosome_9: 4204211-4218300 Chlamydomonas reinhardtii
Cre09.g394251 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 4208301-4218300 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110626 5260 Chlorophyte View MSA
123427195 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.462       Low
cufflinks 20.416     High  
cufflinks 47.804     High High
cufflinks 72.179     High High
cufflinks 14.019     High  
cufflinks 15.933     High  
cufflinks 13.188        
cufflinks 32.836     High  
cufflinks 8.387        
cufflinks 5.825       Low
cufflinks 112.452     High High
cufflinks 22.082     High  
cufflinks 11.344     High  
cufflinks 16.577     High  
cufflinks 44.256     High High
cufflinks 5.672       Low
cufflinks 10.336        
cufflinks 26.712     High  
cufflinks 4.26       Low
cufflinks 15.257     High  
cufflinks 43.588     High High
cufflinks 9.533        
cufflinks 16.346     High  
cufflinks 38.1     High  
cufflinks 7.153       Low
cufflinks 11.6457 1.0959 22.1956   High
cufflinks 20.9742 5.43148 36.5169    
cufflinks 34.2716 0.0 70.4531 High  
cufflinks 18.0375 0.861089 35.2139    
cufflinks 27.6097 3.53527 51.6842    

0 Strain