Gene : FAP140 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g390949 Defline:  Flagellar Associated Protein 140
Genomic Order:  582 Name:  ? Cre09.g390949
Secondary Identifier:  ? PAC:30780955
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g390949 0.5kb upstream 0.5kb upstream 2344 true chromosome_9: 3707731-3710074 Chlamydomonas reinhardtii
Cre09.g390949 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 3707731-3708230 Chlamydomonas reinhardtii
Cre09.g390949 0.5kb downstream 0.5kb downstream 2344 true chromosome_9: 3708231-3710574 Chlamydomonas reinhardtii
Cre09.g390949 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 3710075-3710574 Chlamydomonas reinhardtii
Cre09.g390949 1.0kb upstream 1.0kb upstream 2844 true chromosome_9: 3707231-3710074 Chlamydomonas reinhardtii
Cre09.g390949 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 3707231-3708230 Chlamydomonas reinhardtii
Cre09.g390949 1.0kb downstream 1.0kb downstream 2844 true chromosome_9: 3708231-3711074 Chlamydomonas reinhardtii
Cre09.g390949 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 3710075-3711074 Chlamydomonas reinhardtii
Cre09.g390949 2.0kb upstream 2.0kb upstream 3844 true chromosome_9: 3706231-3710074 Chlamydomonas reinhardtii
Cre09.g390949 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 3706231-3708230 Chlamydomonas reinhardtii
Cre09.g390949 2.0kb downstream 2.0kb downstream 3844 true chromosome_9: 3708231-3712074 Chlamydomonas reinhardtii
Cre09.g390949 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 3710075-3712074 Chlamydomonas reinhardtii
Cre09.g390949 5.0kb upstream 5.0kb upstream 6844 true chromosome_9: 3703231-3710074 Chlamydomonas reinhardtii
Cre09.g390949 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 3703231-3708230 Chlamydomonas reinhardtii
Cre09.g390949 5.0kb downstream 5.0kb downstream 6844 true chromosome_9: 3708231-3715074 Chlamydomonas reinhardtii
Cre09.g390949 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 3710075-3715074 Chlamydomonas reinhardtii
Cre09.g390949 10.0kb upstream 10.0kb upstream 11844 true chromosome_9: 3698231-3710074 Chlamydomonas reinhardtii
Cre09.g390949 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 3698231-3708230 Chlamydomonas reinhardtii
Cre09.g390949 10.0kb downstream 10.0kb downstream 11844 true chromosome_9: 3708231-3720074 Chlamydomonas reinhardtii
Cre09.g390949 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 3710075-3720074 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077253 5260 Chlorophyte View MSA
123395274 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.525        
cufflinks 19.207     High  
cufflinks 54.472     High High
cufflinks 68.896     High High
cufflinks 13.648     High  
cufflinks 18.241     High  
cufflinks 14.16     High  
cufflinks 28.598     High  
cufflinks 9.122       Low
cufflinks 11.043     High  
cufflinks 113.359     High High
cufflinks 28.723     High  
cufflinks 15.184     High  
cufflinks 17.766     High  
cufflinks 70.658     High High
cufflinks 7.856       Low
cufflinks 10.069        
cufflinks 25.883     High  
cufflinks 11.07     High  
cufflinks 16.402     High  
cufflinks 51.027     High High
cufflinks 9.072       Low
cufflinks 21.137     High  
cufflinks 40.892     High  
cufflinks 6.086       Low
cufflinks 6.28841 0.955936 11.6209    
cufflinks 11.0594 2.48118 19.6375   Low
cufflinks 30.9685 0.0 62.4172 High  
cufflinks 12.0882 1.91521 22.2611    
cufflinks 24.7001 4.75109 44.6492    

0 Strain