Gene : DII3 C. reinhardtii v5.6
Primary Identifier:  ? Cre08.g374650 Defline:  (1 of 1) PTHR10098:SF120 - TETRATRICOPEPTIDE REPEAT PROTEIN 29
Genomic Order:  476 Name:  ? Cre08.g374650
Secondary Identifier:  ? PAC:30773786
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g374650 0.5kb upstream 0.5kb upstream 6110 true chromosome_8: 3406807-3412916 Chlamydomonas reinhardtii
Cre08.g374650 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 3412417-3412916 Chlamydomonas reinhardtii
Cre08.g374650 0.5kb downstream 0.5kb downstream 6110 true chromosome_8: 3406307-3412416 Chlamydomonas reinhardtii
Cre08.g374650 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 3406307-3406806 Chlamydomonas reinhardtii
Cre08.g374650 1.0kb upstream 1.0kb upstream 6610 true chromosome_8: 3406807-3413416 Chlamydomonas reinhardtii
Cre08.g374650 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 3412417-3413416 Chlamydomonas reinhardtii
Cre08.g374650 1.0kb downstream 1.0kb downstream 6610 true chromosome_8: 3405807-3412416 Chlamydomonas reinhardtii
Cre08.g374650 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 3405807-3406806 Chlamydomonas reinhardtii
Cre08.g374650 2.0kb upstream 2.0kb upstream 7610 true chromosome_8: 3406807-3414416 Chlamydomonas reinhardtii
Cre08.g374650 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 3412417-3414416 Chlamydomonas reinhardtii
Cre08.g374650 2.0kb downstream 2.0kb downstream 7610 true chromosome_8: 3404807-3412416 Chlamydomonas reinhardtii
Cre08.g374650 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 3404807-3406806 Chlamydomonas reinhardtii
Cre08.g374650 5.0kb upstream 5.0kb upstream 10610 true chromosome_8: 3406807-3417416 Chlamydomonas reinhardtii
Cre08.g374650 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 3412417-3417416 Chlamydomonas reinhardtii
Cre08.g374650 5.0kb downstream 5.0kb downstream 10610 true chromosome_8: 3401807-3412416 Chlamydomonas reinhardtii
Cre08.g374650 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 3401807-3406806 Chlamydomonas reinhardtii
Cre08.g374650 10.0kb upstream 10.0kb upstream 15610 true chromosome_8: 3406807-3422416 Chlamydomonas reinhardtii
Cre08.g374650 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 3412417-3422416 Chlamydomonas reinhardtii
Cre08.g374650 10.0kb downstream 10.0kb downstream 15610 true chromosome_8: 3396807-3412416 Chlamydomonas reinhardtii
Cre08.g374650 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 3396807-3406806 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108626 5260 Chlorophyte View MSA
123427419 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.712       Low
cufflinks 3.349        
cufflinks 5.056        
cufflinks 7.791       High
cufflinks 2.52        
cufflinks 2.701        
cufflinks 3.022        
cufflinks 4.553        
cufflinks 0.464       Low
cufflinks 1.078        
cufflinks 11.249       High
cufflinks 3.687        
cufflinks 1.304        
cufflinks 3.048        
cufflinks 5.12        
cufflinks 0.96       Low
cufflinks 0.987       Low
cufflinks 3.572        
cufflinks 1.129        
cufflinks 4.29        
cufflinks 4.977        
cufflinks 1.165        
cufflinks 3.207        
cufflinks 4.146        
cufflinks 0.662       Low
cufflinks 5.09863 0.863004 9.33426   High
cufflinks 8.39716 2.24496 14.5494    
cufflinks 5.90749 0.0 11.9268    
cufflinks 5.88501 0.958659 10.8114    
cufflinks 6.53153 1.31241 11.7506   Low

0 Strain