Gene : Cre08.g368450 C. reinhardtii v5.6
Defline:  (1 of 1) K12667 - oligosaccharyltransferase complex subunit delta (ribophorin II) (SWP1, RPN2) Genomic Order:  303
Name:  ? Cre08.g368450 Secondary Identifier:  ? PAC:30773420
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g368450 0.5kb upstream 0.5kb upstream 3416 true chromosome_8: 2047520-2050935 Chlamydomonas reinhardtii
Cre08.g368450 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 2050436-2050935 Chlamydomonas reinhardtii
Cre08.g368450 0.5kb downstream 0.5kb downstream 3416 true chromosome_8: 2047020-2050435 Chlamydomonas reinhardtii
Cre08.g368450 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 2047020-2047519 Chlamydomonas reinhardtii
Cre08.g368450 1.0kb upstream 1.0kb upstream 3916 true chromosome_8: 2047520-2051435 Chlamydomonas reinhardtii
Cre08.g368450 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 2050436-2051435 Chlamydomonas reinhardtii
Cre08.g368450 1.0kb downstream 1.0kb downstream 3916 true chromosome_8: 2046520-2050435 Chlamydomonas reinhardtii
Cre08.g368450 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 2046520-2047519 Chlamydomonas reinhardtii
Cre08.g368450 2.0kb upstream 2.0kb upstream 4916 true chromosome_8: 2047520-2052435 Chlamydomonas reinhardtii
Cre08.g368450 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 2050436-2052435 Chlamydomonas reinhardtii
Cre08.g368450 2.0kb downstream 2.0kb downstream 4916 true chromosome_8: 2045520-2050435 Chlamydomonas reinhardtii
Cre08.g368450 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 2045520-2047519 Chlamydomonas reinhardtii
Cre08.g368450 5.0kb upstream 5.0kb upstream 7916 true chromosome_8: 2047520-2055435 Chlamydomonas reinhardtii
Cre08.g368450 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 2050436-2055435 Chlamydomonas reinhardtii
Cre08.g368450 5.0kb downstream 5.0kb downstream 7916 true chromosome_8: 2042520-2050435 Chlamydomonas reinhardtii
Cre08.g368450 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 2042520-2047519 Chlamydomonas reinhardtii
Cre08.g368450 10.0kb upstream 10.0kb upstream 12916 true chromosome_8: 2047520-2060435 Chlamydomonas reinhardtii
Cre08.g368450 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 2050436-2060435 Chlamydomonas reinhardtii
Cre08.g368450 10.0kb downstream 10.0kb downstream 12916 true chromosome_8: 2037520-2050435 Chlamydomonas reinhardtii
Cre08.g368450 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 2037520-2047519 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086246 5260 Chlorophyte View MSA
123427348 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.959     High  
cufflinks 17.649     High High
cufflinks 15.355     High High
cufflinks 10.024        
cufflinks 15.449     High High
cufflinks 14.555     High  
cufflinks 18.391     High High
cufflinks 12.205        
cufflinks 9.681        
cufflinks 12.047     High  
cufflinks 5.954       Low
cufflinks 9.828        
cufflinks 14.255     High  
cufflinks 15.944     High High
cufflinks 8.798        
cufflinks 8.924        
cufflinks 4.2       Low
cufflinks 11.821        
cufflinks 8.274     High  
cufflinks 7.181        
cufflinks 7.836        
cufflinks 3.651       Low
cufflinks 10.731        
cufflinks 8.68        
cufflinks 3.772       Low
cufflinks 29.2638 0.523245 58.0044 High Low
cufflinks 123.391 20.2676 226.514 High  
cufflinks 31.5972 0.0 66.6246 High  
cufflinks 30.4106 0.42896 60.3923 High Low
cufflinks 70.7802 1.71381 139.847 High High

0 Strain